Pre_GI Gene

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Host: NC_020134 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020134:205000 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2072802083801101putative aminopeptidaseQuickGO ontologyBLASTP
2094132104831071transposase for insertion-like sequence element IS1161QuickGO ontologyBLASTP
210542210664123hypothetical protein
211034211468435transporter major facilitator familyQuickGO ontologyBLASTP
2116652128311167hypothetical protein
2128162141891374putative Fe-S oxidoreductaseQuickGO ontologyBLASTP
2141862153881203permeases of the major facilitator superfamilyQuickGO ontologyBLASTP
215390216313924putative Fe-S oxidoreductaseQuickGO ontologyBLASTP
216577216900324rhodanese-like sulfurtransferaseQuickGO ontologyBLASTP
216954217169216hypothetical protein
218724219002279hypothetical protein
2194692209261458lipoprotein LipOQuickGO ontologyBLASTP
221020221955936ABC-type transporter integral membrane subunitQuickGO ontologyBLASTP
221972222838867ABC-type transporter integral membrane subunitQuickGO ontologyBLASTP
2229192245861668peptidase M56 BlaR1QuickGO ontologyBLASTP