Pre_GI: BLASTN Hits

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Query: NC_015957:8777644 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 8777644, End: 8799599, Length: 21956

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003888:4251867*4251867430640654540Streptomyces coelicolor A3(2), complete genome6e-78299BLASTN svgBLASTP svg
NC_003155:5253923*5253923527688222960Streptomyces avermitilis MA-4680, complete genome1e-66262BLASTN svgBLASTP svg
NC_018750:3988196*3988196400732519130Streptomyces venezuelae ATCC 10712, complete genome5e-66260BLASTN svgBLASTP svg
NC_021177:4041915*4041915406445922545Streptomyces fulvissimus DSM 40593, complete genome8e-62246BLASTN svgBLASTP svg
NC_008699:4922465*4922465494869426230Nocardioides sp. JS614, complete genome1e-23119BLASTN svgBLASTP svg
NC_015957:88163558816355883412317769Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_018681:9262000*9262000929365331654Nocardia brasiliensis ATCC 700358 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015656:50847675084767510643621670Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015656:132633*13263316991437282Frankia symbiont of Datisca glomerata chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015671:3470903*3470903349501524113Cellvibrio gilvus ATCC 13127 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014391:6848475*6848475686836219888Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg