Query: NC_015957:4963500 Streptomyces violaceusniger Tu 4113 chromosome, complete genome
Start: 4963500, End: 4981352, Length: 17853
Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_003155:622993 | 622993 | 654326 | 31334 | Streptomyces avermitilis MA-4680, complete genome | 0 | 831 | BLASTN svg | BLASTP svg |
NC_008697:202000 | 202000 | 224876 | 22877 | Nocardioides sp. JS614 plasmid pNOCA01, complete sequence | 9e-160 | 571 | BLASTN svg | BLASTP svg |
NC_013739:5535945 | 5535945 | 5568530 | 32586 | Conexibacter woesei DSM 14684, complete genome | 5e-152 | 545 | BLASTN svg | BLASTP svg |
NC_013757:1438812 | 1438812 | 1473599 | 34788 | Geodermatophilus obscurus DSM 43160, complete genome | 1e-140 | 507 | BLASTN svg | BLASTP svg |
NC_015312:6398931 | 6398931 | 6417277 | 18347 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 4e-134 | 486 | BLASTN svg | BLASTP svg |
NC_014391:6000834 | 6000834 | 6023897 | 23064 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 2e-108 | 400 | BLASTN svg | BLASTP svg |
NC_015957:7301546 | 7301546 | 7327102 | 25557 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 9e-89 | 335 | BLASTN svg | BLASTP svg |
NC_008726:6335961 | 6335961 | 6377424 | 41464 | Mycobacterium vanbaalenii PYR-1, complete genome | 2e-80 | 307 | BLASTN svg | BLASTP svg |
NC_013235:1761539 | 1761539 | 1780599 | 19061 | Nakamurella multipartita DSM 44233, complete genome | 5e-72 | 280 | BLASTN svg | BLASTP svg |
NC_003155:210240* | 210240 | 262191 | 51952 | Streptomyces avermitilis MA-4680, complete genome | 2e-62 | 248 | BLASTN svg | BLASTP svg |
NC_015957:6859259 | 6859259 | 6878954 | 19696 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 2e-56 | 228 | BLASTN svg | BLASTP svg |
NC_014814:4235477 | 4235477 | 4286921 | 51445 | Mycobacterium sp. Spyr1 chromosome, complete genome | 7e-34 | 153 | BLASTN svg | BLASTP svg |
NC_018750:8210500 | 8210500 | 8238499 | 28000 | Streptomyces venezuelae ATCC 10712, complete genome | 3e-33 | 151 | BLASTN svg | BLASTP svg |
NC_008541:472643 | 472643 | 499605 | 26963 | Arthrobacter sp. FB24 chromosome 1, complete sequence | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_015957:7408466 | 7408466 | 7456099 | 47634 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 1e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_013235:3812838* | 3812838 | 3841423 | 28586 | Nakamurella multipartita DSM 44233, complete genome | 9e-12 | 79.8 | BLASTN svg | BLASTP svg |
NC_013235:2257899* | 2257899 | 2298599 | 40701 | Nakamurella multipartita DSM 44233, complete genome | 9e-12 | 79.8 | BLASTN svg | BLASTP svg |
NC_014158:233733 | 233733 | 327711 | 93979 | Tsukamurella paurometabola DSM 20162 chromosome, complete genome | 3e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015957:7348269 | 7348269 | 7396717 | 48449 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007777:3000941 | 3000941 | 3028099 | 27159 | Frankia sp. CcI3, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_006087:1425682 | 1425682 | 1445545 | 19864 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014391:4617688* | 4617688 | 4637289 | 19602 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 8e-06 | 60 | BLASTN svg | BLASTP svg |