Pre_GI: BLASTN Hits

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Query: NC_015957:10403997 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 10403997, End: 10427201, Length: 23205

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome01867BLASTN svgBLASTP svg
NC_010572:41814034181403420609924697Streptomyces griseus subsp. griseus NBRC 13350, complete genome01489BLASTN svgBLASTP svg
NC_018750:21189072118907214335524449Streptomyces venezuelae ATCC 10712, complete genome01267BLASTN svgBLASTP svg
NC_018750:3661243*3661243368475823516Streptomyces venezuelae ATCC 10712, complete genome0644BLASTN svgBLASTP svg
NC_021177:3598700*3598700361863819939Streptomyces fulvissimus DSM 40593, complete genome0642BLASTN svgBLASTP svg
NC_010572:3925803*3925803395628730485Streptomyces griseus subsp. griseus NBRC 13350, complete genome9e-142511BLASTN svgBLASTP svg
NC_013510:54994475499447554883349387Thermomonospora curvata DSM 43183, complete genome5e-54220BLASTN svgBLASTP svg
NC_003888:5042283*5042283508756145279Streptomyces coelicolor A3(2), complete genome1e-48202BLASTN svgBLASTP svg
NC_007777:5087405*5087405511177224368Frankia sp. CcI3, complete genome9e-31143BLASTN svgBLASTP svg
NC_013530:3365742*3365742338937923638Xylanimonas cellulosilytica DSM 15894, complete genome6e-29137BLASTN svgBLASTP svg
NC_013131:10413240*104132401043185718618Catenulispora acidiphila DSM 44928, complete genome9e-28133BLASTN svgBLASTP svg
NC_008705:5144433*5144433517009925667Mycobacterium sp. KMS, complete genome6e-26127BLASTN svgBLASTP svg
NC_008146:5106775*5106775513109924325Mycobacterium sp. MCS, complete genome6e-26127BLASTN svgBLASTP svg
NC_015588:2939747*2939747296269722951Isoptericola variabilis 225 chromosome, complete genome9e-25123BLASTN svgBLASTP svg
NC_010572:3363830*3363830342121457385Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-22115BLASTN svgBLASTP svg
NC_014246:876000*87600089916923170Mobiluncus curtisii ATCC 43063 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_008711:3701635*3701635372498023346Arthrobacter aurescens TC1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_006087:345976*34597640567959704Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013947:613774*61377463382720054Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_018868:1352000*1352000138222930230Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003155:399439942455920566Streptomyces avermitilis MA-4680, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_021177:11871011871013659917890Streptomyces fulvissimus DSM 40593, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008148:2290806*2290806231729826493Rubrobacter xylanophilus DSM 9941, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007513:1900000*1900000192383823839Synechococcus sp. CC9902, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007413:1405817*1405817142811722301Anabaena variabilis ATCC 29413, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013131:10322152*103221521035840336252Catenulispora acidiphila DSM 44928, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012803:19809551980955200418223228Micrococcus luteus NCTC 2665, complete genome3e-0661.9BLASTN svgBLASTP svg