Pre_GI: BLASTN Hits

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Query: NC_015951:107360 Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete

Start: 107360, End: 125429, Length: 18070

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome02597BLASTN svgBLASTP svg
NC_015957:527777*52777754559917823Streptomyces violaceusniger Tu 4113 chromosome, complete genome02587BLASTN svgBLASTP svg
NC_015957:73015467301546732710225557Streptomyces violaceusniger Tu 4113 chromosome, complete genome02579BLASTN svgBLASTP svg
NC_015957:68592596859259687895419696Streptomyces violaceusniger Tu 4113 chromosome, complete genome02571BLASTN svgBLASTP svg
NC_015957:52259035225903524815322251Streptomyces violaceusniger Tu 4113 chromosome, complete genome02571BLASTN svgBLASTP svg
NC_015951:71697716979528623590Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete3e-61244BLASTN svgBLASTP svg
NC_009142:27250002725000275437129372Saccharopolyspora erythraea NRRL 2338, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete9e-0969.9BLASTN svgBLASTP svg
NC_009142:54848835484883550966924787Saccharopolyspora erythraea NRRL 2338, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_019673:1988853*1988853204493756085Saccharothrix espanaensis DSM 44229 complete genome8e-0660BLASTN svgBLASTP svg
NC_015656:2900730*2900730292259921870Frankia symbiont of Datisca glomerata chromosome, complete genome8e-0660BLASTN svgBLASTP svg
NC_014318:63953926395392646309967708Amycolatopsis mediterranei U32 chromosome, complete genome8e-0660BLASTN svgBLASTP svg