Query: NC_015951:107360 Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete
Start: 107360, End: 125429, Length: 18070
Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_015957:7348269 | 7348269 | 7396717 | 48449 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 0 | 2597 | BLASTN svg | BLASTP svg |
NC_015957:527777* | 527777 | 545599 | 17823 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 0 | 2587 | BLASTN svg | BLASTP svg |
NC_015957:7301546 | 7301546 | 7327102 | 25557 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 0 | 2579 | BLASTN svg | BLASTP svg |
NC_015957:6859259 | 6859259 | 6878954 | 19696 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 0 | 2571 | BLASTN svg | BLASTP svg |
NC_015957:5225903 | 5225903 | 5248153 | 22251 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 0 | 2571 | BLASTN svg | BLASTP svg |
NC_015951:71697 | 71697 | 95286 | 23590 | Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete | 3e-61 | 244 | BLASTN svg | BLASTP svg |
NC_009142:2725000 | 2725000 | 2754371 | 29372 | Saccharopolyspora erythraea NRRL 2338, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_009140:121107* | 121107 | 144592 | 23486 | Salmonella enterica enterica sv Newport str. SL254, complete | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_009142:5484883 | 5484883 | 5509669 | 24787 | Saccharopolyspora erythraea NRRL 2338, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_015312:1* | 1 | 24651 | 24651 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 3e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015953:6212366 | 6212366 | 6258418 | 46053 | Streptomyces sp. SirexAA-E chromosome, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_019673:1988853* | 1988853 | 2044937 | 56085 | Saccharothrix espanaensis DSM 44229 complete genome | 8e-06 | 60 | BLASTN svg | BLASTP svg |
NC_015656:2900730* | 2900730 | 2922599 | 21870 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 8e-06 | 60 | BLASTN svg | BLASTP svg |
NC_014318:6395392 | 6395392 | 6463099 | 67708 | Amycolatopsis mediterranei U32 chromosome, complete genome | 8e-06 | 60 | BLASTN svg | BLASTP svg |