Pre_GI: BLASTN Hits

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Query: NC_014323:3195178 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 3195178, End: 3219599, Length: 24422

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015259:485015*48501556418379169Polymorphum gilvum SL003B-26A1 chromosome, complete genome7e-75289BLASTN svgBLASTP svg
NC_010512:95152795152797635724831Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence5e-42180BLASTN svgBLASTP svg
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-33153BLASTN svgBLASTP svg
NC_013446:41828784182878420121918342Comamonas testosteroni CNB-2, complete genome1e-33153BLASTN svgBLASTP svg
NC_015563:5162177*5162177518611723941Delftia sp. Cs1-4 chromosome, complete genome4e-30141BLASTN svgBLASTP svg
NC_010002:2293670*2293670231767724008Delftia acidovorans SPH-1, complete genome4e-30141BLASTN svgBLASTP svg
NC_008752:3902637*3902637393751334877Acidovorax avenae subsp. citrulli AAC00-1, complete genome9e-22113BLASTN svgBLASTP svg
NC_015731:2400526*2400526242549424969Nitrosomonas sp. Is79A3 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009439:2337024*2337024236235425331Pseudomonas mendocina ymp, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010067:24881412488141251937331233Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete8e-1383.8BLASTN svgBLASTP svg
NC_014910:2585747*2585747260852622780Alicycliphilus denitrificans BC chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_008313:2629281*2629281264709917819Ralstonia eutropha H16 chromosome 1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_007953:57292657292660304230117Burkholderia xenovorans LB400 chromosome 3, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_007953:10889331088933110876919837Burkholderia xenovorans LB400 chromosome 3, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_015677:14600001460000148235222353Ramlibacter tataouinensis TTB310 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010623:19616851961685204159979915Burkholderia phymatum STM815 chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_015410:2838132*2838132286405125920Pseudomonas mendocina NK-01 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013421:4714478*4714478478002665549Pectobacterium wasabiae WPP163, complete genome7e-0763.9BLASTN svgBLASTP svg