Pre_GI: BLASTN Hits

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Query: NC_014215:1243125 Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,

Start: 1243125, End: 1268642, Length: 25518

Host Lineage: Propionibacterium freudenreichii; Propionibacterium; Propionibacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Propionibacterium freudenreichii is a member of the "dairy propionibacteria", commonly isolated from cheese and other dairy products. Propionibacterium freudenreichii subsp. shermanii, formerly Propionibacterium shermanii, is important for the development of flavor and the characteristic holes in Swiss cheese. In addition, Propionibacterium freudenreichii subsp. shermanii has been used as a probiotic for humans and animals and may have a role in preventing of colon cancer.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013169:612456*61245664773335278Kytococcus sedentarius DSM 20547, complete genome1e-97365BLASTN svgBLASTP svg
NC_012803:3691*36914264438954Micrococcus luteus NCTC 2665, complete genome4e-92347BLASTN svgBLASTP svg
NC_015125:222231*22223126106738837Microbacterium testaceum StLB037, complete genome7e-32147BLASTN svgBLASTP svg
NC_013131:32225003222500324156619067Catenulispora acidiphila DSM 44928, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014318:5586287*5586287562248536199Amycolatopsis mediterranei U32 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013169:1545890*1545890156556719678Kytococcus sedentarius DSM 20547, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014168:1294000*1294000132534231343Segniliparus rotundus DSM 44985 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013757:3100515*3100515312110420590Geodermatophilus obscurus DSM 43160, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008752:72518972518977609450906Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014391:2579919*2579919261467434756Micromonospora aurantiaca ATCC 27029 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_008705:15577111557711161059952889Mycobacterium sp. KMS, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008146:15776041577604160675629153Mycobacterium sp. MCS, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_020133:24219652421965244809926135Mycobacterium liflandii 128FXT, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013521:2193203*2193203221998826786Sanguibacter keddieii DSM 10542, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008611:3579500*3579500360709927600Mycobacterium ulcerans Agy99, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_006085:92560492560495910233499Propionibacterium acnes KPA171202, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_006361:2225072*2225072225678031709Nocardia farcinica IFM 10152, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007333:14110501411050143510924060Thermobifida fusca YX, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012669:2399649*2399649242257022922Beutenbergia cavernae DSM 12333, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_020133:2886541*2886541291380027260Mycobacterium liflandii 128FXT, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013947:4695000*4695000472086325864Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003888:77062267706226772825922034Streptomyces coelicolor A3(2), complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013595:3388000*3388000341046122462Streptosporangium roseum DSM 43021, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014935:1287494*1287494131489327400Nitratifractor saLSUginis DSM 16511 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_018681:3541484*3541484357298031497Nocardia brasiliensis ATCC 700358 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003888:7561923*7561923764778785865Streptomyces coelicolor A3(2), complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008611:2615204*2615204263604620843Mycobacterium ulcerans Agy99, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010572:1081236*1081236110592624691Streptomyces griseus subsp. griseus NBRC 13350, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010612:3745332*3745332378131835987Mycobacterium marinum M, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013530:17286411728641175062521985Xylanimonas cellulosilytica DSM 15894, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019673:1988853*1988853204493756085Saccharothrix espanaensis DSM 44229 complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019673:20513632051363214091689554Saccharothrix espanaensis DSM 44229 complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019673:3041936*3041936305959917664Saccharothrix espanaensis DSM 44229 complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013093:24715742471574251123439661Actinosynnema mirum DSM 43827, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011666:2109274*2109274213911129838Methylocella silvestris BL2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014472:3530274*3530274355430524032Flavobacteriales bacterium HTCC2170 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013947:613774*61377463382720054Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006177:2943259*2943259296594222684Symbiobacterium thermophilum IAM 14863, complete genome3e-0661.9BLASTN svgBLASTP svg