Pre_GI: BLASTN Hits

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Query: NC_013929:8106492 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 8106492, End: 8128036, Length: 21545

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003888:17511791751179177155020372Streptomyces coelicolor A3(2), complete genome05475BLASTN svgBLASTP svg
NC_003155:79790507979050800260423555Streptomyces avermitilis MA-4680, complete genome05128BLASTN svgBLASTP svg
NC_018750:13900291390029140825618228Streptomyces venezuelae ATCC 10712, complete genome02490BLASTN svgBLASTP svg
NC_007333:2093167*2093167211709923933Thermobifida fusca YX, complete genome1e-177630BLASTN svgBLASTP svg
NC_014815:5888934*5888934590800519072Micromonospora sp. L5 chromosome, complete genome6e-115422BLASTN svgBLASTP svg
NC_013159:2913927*2913927293423220306Saccharomonospora viridis DSM 43017, complete genome9e-74285BLASTN svgBLASTP svg
NC_015145:36571033657103368692829826Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome2e-59238BLASTN svgBLASTP svg
NC_008611:2615204*2615204263604620843Mycobacterium ulcerans Agy99, complete genome3e-58234BLASTN svgBLASTP svg
NC_020133:2886541*2886541291380027260Mycobacterium liflandii 128FXT, complete genome3e-58234BLASTN svgBLASTP svg
NC_008541:40662944066294409493828645Arthrobacter sp. FB24 chromosome 1, complete sequence5e-57230BLASTN svgBLASTP svg
NC_013093:24715742471574251123439661Actinosynnema mirum DSM 43827, complete genome2e-41178BLASTN svgBLASTP svg
NC_014391:34456723445672346889423223Micromonospora aurantiaca ATCC 27029 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015859:16315731631573165925327681Corynebacterium variabile DSM 44702 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004463:1520303*1520303154802027718Bradyrhizobium japonicum USDA 110, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014210:23728132372813241181239000Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_014972:2980974*2980974299955018577Desulfobulbus propionicus DSM 2032 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015514:39116553911655393796226308Cellulomonas fimi ATCC 484 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_021177:21858982185898220648120584Streptomyces fulvissimus DSM 40593, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015957:85697218569721859285323133Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011886:43364174336417436804431628Arthrobacter chlorophenolicus A6, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018866:1706000*1706000173043224433Dehalobacter sp. DCA chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015953:47469834746983477386726885Streptomyces sp. SirexAA-E chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013093:2633000*2633000269098057981Actinosynnema mirum DSM 43827, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013595:18512261851226187265321428Streptosporangium roseum DSM 43021, complete genome1e-0560BLASTN svgBLASTP svg
NC_013595:19649319649322011923627Streptosporangium roseum DSM 43021, complete genome1e-0560BLASTN svgBLASTP svg
NC_014666:36296963629696364909919404Frankia sp. EuI1c chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_015953:20590832059083208140822326Streptomyces sp. SirexAA-E chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_018750:5399316*5399316541712617811Streptomyces venezuelae ATCC 10712, complete genome1e-0560BLASTN svgBLASTP svg
NC_019673:1988853*1988853204493756085Saccharothrix espanaensis DSM 44229 complete genome1e-0560BLASTN svgBLASTP svg
NC_013235:508585*50858553729628712Nakamurella multipartita DSM 44233, complete genome1e-0560BLASTN svgBLASTP svg