Query: NC_013929:8106492 Streptomyces scabiei 87.22 chromosome, complete genome
Start: 8106492, End: 8128036, Length: 21545
Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_003888:1751179 | 1751179 | 1771550 | 20372 | Streptomyces coelicolor A3(2), complete genome | 0 | 5475 | BLASTN svg | BLASTP svg |
NC_003155:7979050 | 7979050 | 8002604 | 23555 | Streptomyces avermitilis MA-4680, complete genome | 0 | 5128 | BLASTN svg | BLASTP svg |
NC_018750:1390029 | 1390029 | 1408256 | 18228 | Streptomyces venezuelae ATCC 10712, complete genome | 0 | 2490 | BLASTN svg | BLASTP svg |
NC_007333:2093167* | 2093167 | 2117099 | 23933 | Thermobifida fusca YX, complete genome | 1e-177 | 630 | BLASTN svg | BLASTP svg |
NC_014815:5888934* | 5888934 | 5908005 | 19072 | Micromonospora sp. L5 chromosome, complete genome | 6e-115 | 422 | BLASTN svg | BLASTP svg |
NC_013159:2913927* | 2913927 | 2934232 | 20306 | Saccharomonospora viridis DSM 43017, complete genome | 9e-74 | 285 | BLASTN svg | BLASTP svg |
NC_015145:3657103 | 3657103 | 3686928 | 29826 | Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome | 2e-59 | 238 | BLASTN svg | BLASTP svg |
NC_008611:2615204* | 2615204 | 2636046 | 20843 | Mycobacterium ulcerans Agy99, complete genome | 3e-58 | 234 | BLASTN svg | BLASTP svg |
NC_020133:2886541* | 2886541 | 2913800 | 27260 | Mycobacterium liflandii 128FXT, complete genome | 3e-58 | 234 | BLASTN svg | BLASTP svg |
NC_008541:4066294 | 4066294 | 4094938 | 28645 | Arthrobacter sp. FB24 chromosome 1, complete sequence | 5e-57 | 230 | BLASTN svg | BLASTP svg |
NC_013093:2471574 | 2471574 | 2511234 | 39661 | Actinosynnema mirum DSM 43827, complete genome | 2e-41 | 178 | BLASTN svg | BLASTP svg |
NC_014391:3445672 | 3445672 | 3468894 | 23223 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_015859:1631573 | 1631573 | 1659253 | 27681 | Corynebacterium variabile DSM 44702 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_004463:1520303* | 1520303 | 1548020 | 27718 | Bradyrhizobium japonicum USDA 110, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_014210:2372813 | 2372813 | 2411812 | 39000 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014972:2980974* | 2980974 | 2999550 | 18577 | Desulfobulbus propionicus DSM 2032 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015514:3911655 | 3911655 | 3937962 | 26308 | Cellulomonas fimi ATCC 484 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_021177:2185898 | 2185898 | 2206481 | 20584 | Streptomyces fulvissimus DSM 40593, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015957:8569721 | 8569721 | 8592853 | 23133 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_011886:4336417 | 4336417 | 4368044 | 31628 | Arthrobacter chlorophenolicus A6, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_018866:1706000* | 1706000 | 1730432 | 24433 | Dehalobacter sp. DCA chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015953:4746983 | 4746983 | 4773867 | 26885 | Streptomyces sp. SirexAA-E chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013093:2633000* | 2633000 | 2690980 | 57981 | Actinosynnema mirum DSM 43827, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013595:1851226 | 1851226 | 1872653 | 21428 | Streptosporangium roseum DSM 43021, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_013595:196493 | 196493 | 220119 | 23627 | Streptosporangium roseum DSM 43021, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_014666:3629696 | 3629696 | 3649099 | 19404 | Frankia sp. EuI1c chromosome, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_015953:2059083 | 2059083 | 2081408 | 22326 | Streptomyces sp. SirexAA-E chromosome, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_018750:5399316* | 5399316 | 5417126 | 17811 | Streptomyces venezuelae ATCC 10712, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_019673:1988853* | 1988853 | 2044937 | 56085 | Saccharothrix espanaensis DSM 44229 complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_013235:508585* | 508585 | 537296 | 28712 | Nakamurella multipartita DSM 44233, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |