Pre_GI: BLASTN Hits

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Query: NC_013929:5927935 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5927935, End: 5948099, Length: 20165

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003888:43143894314389433545821070Streptomyces coelicolor A3(2), complete genome01152BLASTN svgBLASTP svg
NC_015957:1070500*1070500110058130082Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-63250BLASTN svgBLASTP svg
NC_018750:3249756*3249756327318823433Streptomyces venezuelae ATCC 10712, complete genome3e-30141BLASTN svgBLASTP svg
NC_014165:925009250011009917600Thermobispora bispora DSM 43833 chromosome, complete genome7e-22113BLASTN svgBLASTP svg
NC_014210:72371972371974915525437Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-1179.8BLASTN svgBLASTP svg
NC_007777:27494222749422277456125140Frankia sp. CcI3, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010407:24061132406113242499918887Clavibacter michiganensis subsp. sepedonicus chromosome, complete6e-1073.8BLASTN svgBLASTP svg
NC_015677:36854523685452370903723586Ramlibacter tataouinensis TTB310 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013510:5115500*5115500514328527786Thermomonospora curvata DSM 43183, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013595:9547254*9547254957863931386Streptosporangium roseum DSM 43021, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008278:31695003169500319375824259Frankia alni ACN14a, complete genome2e-0661.9BLASTN svgBLASTP svg