Pre_GI: BLASTN Hits

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Query: NC_013929:3660321 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3660321, End: 3684099, Length: 23779

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003888:76596397659639770388744249Streptomyces coelicolor A3(2), complete genome01043BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-23117BLASTN svgBLASTP svg
NC_015957:51099025109902512826818367Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-23117BLASTN svgBLASTP svg
NC_013093:2230171*2230171225498024810Actinosynnema mirum DSM 43827, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_018750:61326196132619616363731019Streptomyces venezuelae ATCC 10712, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015953:40455004045500406559920100Streptomyces sp. SirexAA-E chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014814:2588628*2588628264757658949Mycobacterium sp. Spyr1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg