Query: NC_013714:2203854 Bifidobacterium dentium Bd1, complete genome
Start: 2203854, End: 2222310, Length: 18457
Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008618:1804610* | 1804610 | 1830737 | 26128 | Bifidobacterium adolescentis ATCC 15703, complete genome | 0 | 4526 | BLASTN svg | BLASTP svg |
| NC_018720:1878201 | 1878201 | 1902785 | 24585 | Bifidobacterium asteroides PRL2011 chromosome, complete genome | 0 | 1181 | BLASTN svg | BLASTP svg |
| NC_010407:2038499 | 2038499 | 2056747 | 18249 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 0 | 676 | BLASTN svg | BLASTP svg |
| NC_021177:5697210* | 5697210 | 5721877 | 24668 | Streptomyces fulvissimus DSM 40593, complete genome | 5e-149 | 535 | BLASTN svg | BLASTP svg |
| NC_018750:5399316* | 5399316 | 5417126 | 17811 | Streptomyces venezuelae ATCC 10712, complete genome | 3e-147 | 529 | BLASTN svg | BLASTP svg |
| NC_014210:397922* | 397922 | 417599 | 19678 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 3e-147 | 529 | BLASTN svg | BLASTP svg |
| NC_013093:7174636 | 7174636 | 7198865 | 24230 | Actinosynnema mirum DSM 43827, complete genome | 1e-143 | 517 | BLASTN svg | BLASTP svg |
| NC_013715:1445959 | 1445959 | 1468099 | 22141 | Rothia mucilaginosa DY-18, complete genome | 3e-141 | 509 | BLASTN svg | BLASTP svg |
| NC_019673:8114376 | 8114376 | 8136099 | 21724 | Saccharothrix espanaensis DSM 44229 complete genome | 5e-115 | 422 | BLASTN svg | BLASTP svg |
| NC_012814:1682500* | 1682500 | 1710422 | 27923 | Bifidobacterium animalis subsp. lactis Bl-04, complete genome | 1e-60 | 242 | BLASTN svg | BLASTP svg |
| NC_007516:1974500* | 1974500 | 1995616 | 21117 | Synechococcus sp. CC9605, complete genome | 3e-27 | 131 | BLASTN svg | BLASTP svg |
| NC_010501:5735656* | 5735656 | 5773339 | 37684 | Pseudomonas putida W619, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
| NC_015589:3711821 | 3711821 | 3757930 | 46110 | Desulfotomaculum ruminis DSM 2154 chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
| NC_007005:6056765 | 6056765 | 6086052 | 29288 | Pseudomonas syringae pv. syringae B728a, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
| NC_006677:1431500* | 1431500 | 1456222 | 24723 | Gluconobacter oxydans 621H, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
| NC_002947:6152500 | 6152500 | 6185499 | 33000 | Pseudomonas putida KT2440, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_009512:5920960 | 5920960 | 5955185 | 34226 | Pseudomonas putida F1, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_015733:5955467* | 5955467 | 5987999 | 32533 | Pseudomonas putida S16 chromosome, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_007492:6372900* | 6372900 | 6435843 | 62944 | Pseudomonas fluorescens PfO-1, complete genome | 6e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_014363:114239* | 114239 | 174099 | 59861 | Olsenella uli DSM 7084 chromosome, complete genome | 2e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_008009:5139896* | 5139896 | 5178003 | 38108 | Acidobacteria bacterium Ellin345, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_016002:2591189 | 2591189 | 2614599 | 23411 | Pseudogulbenkiania sp. NH8B, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_008554:3177723* | 3177723 | 3202565 | 24843 | Syntrophobacter fumaroxidans MPOB, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_011768:4571869* | 4571869 | 4595285 | 23417 | Desulfatibacillum alkenivorans AK-01, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_015565:2736500 | 2736500 | 2772939 | 36440 | Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_015740:4508375 | 4508375 | 4528141 | 19767 | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_013203:1447340* | 1447340 | 1470214 | 22875 | Atopobium parvulum DSM 20469, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_011420:365505 | 365505 | 389635 | 24131 | Rhodospirillum centenum SW, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_011027:1153592* | 1153592 | 1176786 | 23195 | Chlorobaculum parvum NCIB 8327, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_004337:3590323* | 3590323 | 3952993 | 362671 | Shigella flexneri 2a str. 301, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_007513:513806* | 513806 | 537566 | 23761 | Synechococcus sp. CC9902, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |