Query: NC_013316:2585666 Clostridium difficile R20291, complete genome
Start: 2585666, End: 2609529, Length: 23864
Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_015687:1478668 | 1478668 | 1502671 | 24004 | Clostridium acetobutylicum DSM 1731 chromosome, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_008555:2628858* | 2628858 | 2648002 | 19145 | Listeria welshimeri serovar 6b str. SLCC5334, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_003212:2814737* | 2814737 | 2833905 | 19169 | Listeria innocua Clip11262, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_003210:2721559* | 2721559 | 2744138 | 22580 | Listeria monocytogenes EGD-e, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_020291:5093138 | 5093138 | 5120617 | 27480 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_015555:2259500* | 2259500 | 2304599 | 45100 | Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_014328:303063* | 303063 | 377862 | 74800 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_010674:1822963 | 1822963 | 1842733 | 19771 | Clostridium botulinum B str. Eklund 17B, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_008262:784878* | 784878 | 829910 | 45033 | Clostridium perfringens SM101, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_010723:1967106 | 1967106 | 1991119 | 24014 | Clostridium botulinum E3 str. Alaska E43, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_020410:3755978 | 3755978 | 3774911 | 18934 | Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_018664:1279950 | 1279950 | 1299860 | 19911 | Clostridium acidurici 9a chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_009725:3763922 | 3763922 | 3783731 | 19810 | Bacillus amyloliquefaciens FZB42, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_019970:2551607* | 2551607 | 2578382 | 26776 | Thermoanaerobacterium thermosaccharolyticum M0795, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_013887:1462918* | 1462918 | 1481668 | 18751 | Methanocaldococcus sp. FS406-22 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010718:2337209* | 2337209 | 2373181 | 35973 | Natranaerobius thermophilus JW/NM-WN-LF, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |