Pre_GI: BLASTN Hits

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Query: NC_013315:2505792 Clostridium difficile CD196 chromosome, complete genome

Start: 2505792, End: 2528973, Length: 23182

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013316:25856662585666260952923864Clostridium difficile R20291, complete genome05689BLASTN svgBLASTP svg
NC_015687:14786681478668150267124004Clostridium acetobutylicum DSM 1731 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008555:2628858*2628858264800219145Listeria welshimeri serovar 6b str. SLCC5334, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_003212:2814737*2814737283390519169Listeria innocua Clip11262, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_003210:2721559*2721559274413822580Listeria monocytogenes EGD-e, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_020291:50931385093138512061727480Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015555:2259500*2259500230459945100Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_014328:303063*30306337786274800Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010674:18229631822963184273319771Clostridium botulinum B str. Eklund 17B, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008262:784878*78487882991045033Clostridium perfringens SM101, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010723:19671061967106199111924014Clostridium botulinum E3 str. Alaska E43, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020410:37559783755978377491118934Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete7e-0763.9BLASTN svgBLASTP svg
NC_018664:12799501279950129986019911Clostridium acidurici 9a chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009725:37639223763922378373119810Bacillus amyloliquefaciens FZB42, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019970:2551607*2551607257838226776Thermoanaerobacterium thermosaccharolyticum M0795, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013887:1462918*1462918148166818751Methanocaldococcus sp. FS406-22 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010718:2337209*2337209237318135973Natranaerobius thermophilus JW/NM-WN-LF, complete genome3e-0661.9BLASTN svgBLASTP svg