Pre_GI: BLASTN Hits

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Query: NC_012791:4007780 Variovorax paradoxus S110 chromosome 1, complete genome

Start: 4007780, End: 4030673, Length: 22894

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015563:3979500*3979500400273623237Delftia sp. Cs1-4 chromosome, complete genome0989BLASTN svgBLASTP svg
NC_015422:3581848*3581848360595924112Alicycliphilus denitrificans K601 chromosome, complete genome0948BLASTN svgBLASTP svg
NC_011071:10842108423591025069Stenotrophomonas maltophilia R551-3, complete genome3e-49204BLASTN svgBLASTP svg
NC_008314:18252231825223184828923067Ralstonia eutropha H16 chromosome 2, complete sequence3e-46194BLASTN svgBLASTP svg
NC_010172:575005750011716259663Methylobacterium extorquens PA1, complete genome6e-29137BLASTN svgBLASTP svg
NC_003112:14235281423528145518831661Neisseria meningitidis MC58, complete genome2e-28135BLASTN svgBLASTP svg
NC_003116:1518110*1518110154147823369Neisseria meningitidis Z2491, complete genome5e-26127BLASTN svgBLASTP svg
NC_019940:2893535*2893535291820624672Thioflavicoccus mobilis 8321 chromosome, complete genome9e-25123BLASTN svgBLASTP svg
NC_014910:15019521501952152412822177Alicycliphilus denitrificans BC chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_019940:18378631837863186010522243Thioflavicoccus mobilis 8321 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_010120:13135001313500133123817739Neisseria meningitidis 053442, complete genome1e-23119BLASTN svgBLASTP svg
NC_015580:141379*14137916878827410Novosphingobium sp. PP1Y, complete genome8e-22113BLASTN svgBLASTP svg
NC_005085:26099342609934263614826215Chromobacterium violaceum ATCC 12472, complete genome3e-21111BLASTN svgBLASTP svg
NC_008767:1321129*1321129134743826310Neisseria meningitidis FAM18, complete genome3e-21111BLASTN svgBLASTP svg
NC_010172:57304657304660029627251Methylobacterium extorquens PA1, complete genome1e-20109BLASTN svgBLASTP svg
NC_021066:21974902197490222049723008Raoultella ornithinolytica B6, complete genome5e-20107BLASTN svgBLASTP svg
NC_021150:1677811*1677811170249124681Azotobacter vinelandii CA6, complete genome2e-19105BLASTN svgBLASTP svg
NC_015947:22314932231493225840026908Burkholderia sp. JV3 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_012560:1677798*1677798170247824681Azotobacter vinelandii DJ, complete genome2e-19105BLASTN svgBLASTP svg
NC_007948:15748811574881160833933459Polaromonas sp. JS666, complete genome8e-19103BLASTN svgBLASTP svg
NC_014752:131994*13199415436422371Neisseria lactamica ST-640, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015856:1271295*1271295129109919805Collimonas fungivorans Ter331 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_011757:1146608*1146608117421827611Methylobacterium chloromethanicum CM4, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015976:2900891*2900891292514524255Sphingobium sp. SYK-6, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009952:592000*59200063739445395Dinoroseobacter shibae DFL 12, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007412:14775714775717525527499Anabaena variabilis ATCC 29413 plasmid C, complete sequence7e-1383.8BLASTN svgBLASTP svg
NC_007778:5079500*5079500510170222203Rhodopseudomonas palustris HaA2, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015733:715947*71594774917233226Pseudomonas putida S16 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010501:4989455*4989455501446425010Pseudomonas putida W619, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009512:755658*75565878272327066Pseudomonas putida F1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010002:4175809*4175809419921123403Delftia acidovorans SPH-1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012691:2614603*26146032727599112997Tolumonas auensis DSM 9187, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013508:1351447*1351447137533523889Edwardsiella tarda EIB202, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010804:28086762808676283109922424Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-1075.8BLASTN svgBLASTP svg
NC_005085:20149872014987204537430388Chromobacterium violaceum ATCC 12472, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014121:2745097*2745097276822023124Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0971.9BLASTN svgBLASTP svg
NC_014500:2934232*2934232295717222941Dickeya dadantii 3937 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015572:4618467*4618467464627927813Methylomonas methanica MC09 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015593:2103815*2103815214825244438Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete1e-0869.9BLASTN svgBLASTP svg
NC_016048:2678205*2678205271916340959Oscillibacter valericigenes Sjm18-20, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012704:2296500*2296500231998023481Corynebacterium kroppenstedtii DSM 44385, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014318:3947845*3947845397099423150Amycolatopsis mediterranei U32 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012559:1663214*1663214168255819345Laribacter hongkongensis HLHK9, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011892:779757797512040642432Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete2e-0765.9BLASTN svgBLASTP svg
AC_000091:27332527332530179728473Escherichia coli W3110 DNA, complete genome7e-0763.9BLASTN svgBLASTP svg
CU928145:29908029908032372424645Escherichia coli 55989 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_000913:27207127207130179729727Escherichia coli K12, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011748:29908029908032372424645Escherichia coli 55989, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014500:3744705*3744705376630221598Dickeya dadantii 3937 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006177:12383*123833284720465Symbiobacterium thermophilum IAM 14863, complete genome3e-0661.9BLASTN svgBLASTP svg