Query: NC_011898:3159411 Clostridium cellulolyticum H10, complete genome
Start: 3159411, End: 3205197, Length: 45787
Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria
General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_011898:3658372 | 3658372 | 3679259 | 20888 | Clostridium cellulolyticum H10, complete genome | 0 | 1098 | BLASTN svg | BLASTP svg |
| NC_007907:2249607 | 2249607 | 2272501 | 22895 | Desulfitobacterium hafniense Y51, complete genome | 3e-115 | 424 | BLASTN svg | BLASTP svg |
| NC_016048:4163225 | 4163225 | 4211099 | 47875 | Oscillibacter valericigenes Sjm18-20, complete genome | 3e-63 | 252 | BLASTN svg | BLASTP svg |
| NC_015589:1523203 | 1523203 | 1542208 | 19006 | Desulfotomaculum ruminis DSM 2154 chromosome, complete genome | 1e-31 | 147 | BLASTN svg | BLASTP svg |
| NC_014376:3796990* | 3796990 | 3820563 | 23574 | Clostridium saccharolyticum WM1 chromosome, complete genome | 4e-25 | 125 | BLASTN svg | BLASTP svg |
| NC_020291:5981006 | 5981006 | 6008727 | 27722 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 6e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_020291:6274030 | 6274030 | 6294824 | 20795 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 9e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_014614:6115* | 6115 | 49206 | 43092 | Clostridium sticklandii, complete genome | 9e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_014614:260782 | 260782 | 282599 | 21818 | Clostridium sticklandii, complete genome | 4e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_014614:2333890* | 2333890 | 2356338 | 22449 | Clostridium sticklandii, complete genome | 6e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_009012:2953638* | 2953638 | 3017543 | 63906 | Clostridium thermocellum ATCC 27405, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_020291:2487575 | 2487575 | 2510688 | 23114 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_015913:1082323 | 1082323 | 1102689 | 20367 | Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_012440:1405879* | 1405879 | 1430585 | 24707 | Persephonella marina EX-H1, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_010003:1746319 | 1746319 | 1768351 | 22033 | Petrotoga mobilis SJ95, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_010003:225420 | 225420 | 247963 | 22544 | Petrotoga mobilis SJ95, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_010003:528855 | 528855 | 555025 | 26171 | Petrotoga mobilis SJ95, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015634:2445396* | 2445396 | 2463869 | 18474 | Bacillus coagulans 2-6 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_018664:287769 | 287769 | 306954 | 19186 | Clostridium acidurici 9a chromosome, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015474:983468* | 983468 | 1007585 | 24118 | Pyrococcus sp. NA2 chromosome, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008593:2281896 | 2281896 | 2305900 | 24005 | Clostridium novyi NT, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008321:1993541* | 1993541 | 2019348 | 25808 | Shewanella sp. MR-4, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |