Pre_GI: BLASTN Hits

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Query: NC_011660:2756860 Listeria monocytogenes HCC23 chromosome, complete genome

Start: 2756860, End: 2775805, Length: 18946

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004668:3156247*3156247318179425548Enterococcus faecalis V583, complete genome1e-35159BLASTN svgBLASTP svg
NC_012673:1679744*1679744169891319170Exiguobacterium sp. AT1b, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_015275:3594890*3594890363588740998Clostridium lentocellum DSM 5427 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
UCMB5137:1375622*1375622139480219181Bacillus atrophaeus UCMB-51376e-1073.8BLASTN svgBLASTP svg
NC_011567:1*13972539725Anoxybacillus flavithermus WK1, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_014654:391201*39120141082919629Halanaerobium sp. 'sapolanicus' chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_018665:1*12938529385Exiguobacterium antarcticum B7 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014914:13272451327245135092223678Taylorella equigenitalis MCE9 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_005362:52848528487339820551Lactobacillus johnsonii NCC 533, complete genome9e-0660BLASTN svgBLASTP svg