Pre_GI: BLASTN Hits

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Query: NC_011004:4073916 Rhodopseudomonas palustris TIE-1, complete genome

Start: 4073916, End: 4117599, Length: 43684

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008435:604772*60477264849843727Rhodopseudomonas palustris BisA53, complete genome02488BLASTN svgBLASTP svg
NC_007958:23706192370619240281732199Rhodopseudomonas palustris BisB5, complete genome0932BLASTN svgBLASTP svg
NC_011004:24577782457778249046532688Rhodopseudomonas palustris TIE-1, complete genome0924BLASTN svgBLASTP svg
NC_014375:21761221761224296425353Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome4e-19105BLASTN svgBLASTP svg
NC_015731:111668216682Nitrosomonas sp. Is79A3 chromosome, complete genome2e-18103BLASTN svgBLASTP svg
NC_007404:974461974461101843943979Thiobacillus denitrificans ATCC 25259, complete genome2e-18103BLASTN svgBLASTP svg
NC_008380:2210649*2210649225616245514Rhizobium leguminosarum bv. viciae 3841, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010524:4644587*4644587468982245236Leptothrix cholodnii SP-6, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_011757:51700051700055359936600Methylobacterium chloromethanicum CM4, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_015422:18761021876102190372527624Alicycliphilus denitrificans K601 chromosome, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_021150:5298500*5298500533099932500Azotobacter vinelandii CA6, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_010172:3946644*3946644397036123718Methylobacterium extorquens PA1, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_011004:2507566*2507566253137523810Rhodopseudomonas palustris TIE-1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_006513:1379735*1379735146218482450Azoarcus sp. EbN1, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_007434:39731453973145401522642082Burkholderia pseudomallei 1710b chromosome I, complete sequence9e-1487.7BLASTN svgBLASTP svg
NC_009050:604950*60495062896424015Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence9e-1487.7BLASTN svgBLASTP svg
NC_011145:14945211494521151310618586Anaeromyxobacter sp. K, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_011420:69843698439927529433Rhodospirillum centenum SW, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_004463:55409245540924556841727494Bradyrhizobium japonicum USDA 110, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_003902:62482862482864848923662Xanthomonas campestris pv. campestris str. ATCC 33913, complete5e-0971.9BLASTN svgBLASTP svg
NC_007086:62689162689165055223662Xanthomonas campestris pv. campestris str. 8004, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_007958:498549852839523411Rhodopseudomonas palustris BisB5, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010688:60501860501862846423447Xanthomonas campestris pv. campestris, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_011662:10417251041725106095019226Thauera sp. MZ1T, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_015711:48113494811349483521923871Myxococcus fulvus HW-1 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_010125:1*12375623756Gluconacetobacter diazotrophicus PAl 5, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015572:21863942186394223161345220Methylomonas methanica MC09 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_009720:46407846407848874724670Xanthobacter autotrophicus Py2, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011757:1532047*1532047155075218706Methylobacterium chloromethanicum CM4, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011757:39881*398817409934219Methylobacterium chloromethanicum CM4, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007644:626992*62699269973472743Moorella thermoacetica ATCC 39073, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_002935:781172*78117280470523534Corynebacterium diphtheriae NCTC 13129, complete genome5e-0661.9BLASTN svgBLASTP svg