Query: NC_011004:4073916 Rhodopseudomonas palustris TIE-1, complete genome
Start: 4073916, End: 4117599, Length: 43684
Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008435:604772* | 604772 | 648498 | 43727 | Rhodopseudomonas palustris BisA53, complete genome | 0 | 2488 | BLASTN svg | BLASTP svg |
NC_007958:2370619 | 2370619 | 2402817 | 32199 | Rhodopseudomonas palustris BisB5, complete genome | 0 | 932 | BLASTN svg | BLASTP svg |
NC_011004:2457778 | 2457778 | 2490465 | 32688 | Rhodopseudomonas palustris TIE-1, complete genome | 0 | 924 | BLASTN svg | BLASTP svg |
NC_014375:217612 | 217612 | 242964 | 25353 | Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome | 4e-19 | 105 | BLASTN svg | BLASTP svg |
NC_015731:1 | 1 | 16682 | 16682 | Nitrosomonas sp. Is79A3 chromosome, complete genome | 2e-18 | 103 | BLASTN svg | BLASTP svg |
NC_007404:974461 | 974461 | 1018439 | 43979 | Thiobacillus denitrificans ATCC 25259, complete genome | 2e-18 | 103 | BLASTN svg | BLASTP svg |
NC_008380:2210649* | 2210649 | 2256162 | 45514 | Rhizobium leguminosarum bv. viciae 3841, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_010524:4644587* | 4644587 | 4689822 | 45236 | Leptothrix cholodnii SP-6, complete genome | 4e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_011757:517000 | 517000 | 553599 | 36600 | Methylobacterium chloromethanicum CM4, complete genome | 4e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_012560:5338707* | 5338707 | 5372999 | 34293 | Azotobacter vinelandii DJ, complete genome | 4e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_015422:1876102 | 1876102 | 1903725 | 27624 | Alicycliphilus denitrificans K601 chromosome, complete genome | 4e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_021150:5298500* | 5298500 | 5330999 | 32500 | Azotobacter vinelandii CA6, complete genome | 4e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_010172:3946644* | 3946644 | 3970361 | 23718 | Methylobacterium extorquens PA1, complete genome | 6e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_011004:2507566* | 2507566 | 2531375 | 23810 | Rhodopseudomonas palustris TIE-1, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_006513:1379735* | 1379735 | 1462184 | 82450 | Azoarcus sp. EbN1, complete genome | 9e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_007434:3973145 | 3973145 | 4015226 | 42082 | Burkholderia pseudomallei 1710b chromosome I, complete sequence | 9e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_009050:604950* | 604950 | 628964 | 24015 | Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence | 9e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_011145:1494521 | 1494521 | 1513106 | 18586 | Anaeromyxobacter sp. K, complete genome | 4e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_011420:69843 | 69843 | 99275 | 29433 | Rhodospirillum centenum SW, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_004463:5540924 | 5540924 | 5568417 | 27494 | Bradyrhizobium japonicum USDA 110, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_003902:624828 | 624828 | 648489 | 23662 | Xanthomonas campestris pv. campestris str. ATCC 33913, complete | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_007086:626891 | 626891 | 650552 | 23662 | Xanthomonas campestris pv. campestris str. 8004, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_007958:4985 | 4985 | 28395 | 23411 | Rhodopseudomonas palustris BisB5, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010688:605018 | 605018 | 628464 | 23447 | Xanthomonas campestris pv. campestris, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_011662:1041725 | 1041725 | 1060950 | 19226 | Thauera sp. MZ1T, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015711:4811349 | 4811349 | 4835219 | 23871 | Myxococcus fulvus HW-1 chromosome, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010125:1* | 1 | 23756 | 23756 | Gluconacetobacter diazotrophicus PAl 5, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015572:2186394 | 2186394 | 2231613 | 45220 | Methylomonas methanica MC09 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009720:464078 | 464078 | 488747 | 24670 | Xanthobacter autotrophicus Py2, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_011757:1532047* | 1532047 | 1550752 | 18706 | Methylobacterium chloromethanicum CM4, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_011757:39881* | 39881 | 74099 | 34219 | Methylobacterium chloromethanicum CM4, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_007644:626992* | 626992 | 699734 | 72743 | Moorella thermoacetica ATCC 39073, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_002935:781172* | 781172 | 804705 | 23534 | Corynebacterium diphtheriae NCTC 13129, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |