Query: NC_010645:3239420 Bordetella avium 197N, complete genome
Start: 3239420, End: 3261669, Length: 22250
Host Lineage: Bordetella avium; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria
General Information: This strain is a spontaneous nalidixic acid-resistant derivative of virulent strain 197. This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. This organism infects the respiratory tract of birds, and causes bordetellosis in commercially important animals such as turkeys, resulting in devastating losses every year due to secondary infections.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_007347:3204637 | 3204637 | 3235485 | 30849 | Ralstonia eutropha JMP134 chromosome 1, complete sequence | 0 | 1047 | BLASTN svg | BLASTP svg |
| NC_005085:2457295 | 2457295 | 2484283 | 26989 | Chromobacterium violaceum ATCC 12472, complete genome | 8e-167 | 595 | BLASTN svg | BLASTP svg |
| NC_016002:1975000* | 1975000 | 2024947 | 49948 | Pseudogulbenkiania sp. NH8B, complete genome | 9e-145 | 521 | BLASTN svg | BLASTP svg |
| NC_011901:2739984 | 2739984 | 2762224 | 22241 | Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete | 1e-128 | 468 | BLASTN svg | BLASTP svg |
| NC_007404:2048000 | 2048000 | 2068961 | 20962 | Thiobacillus denitrificans ATCC 25259, complete genome | 1e-125 | 458 | BLASTN svg | BLASTP svg |
| NC_015740:1594376 | 1594376 | 1616347 | 21972 | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete | 1e-113 | 418 | BLASTN svg | BLASTP svg |
| NC_009434:1743696 | 1743696 | 1764099 | 20404 | Pseudomonas stutzeri A1501, complete genome | 2e-111 | 410 | BLASTN svg | BLASTP svg |
| NC_009439:3485000 | 3485000 | 3507217 | 22218 | Pseudomonas mendocina ymp, complete genome | 9e-108 | 398 | BLASTN svg | BLASTP svg |
| NC_008463:4389721* | 4389721 | 4416635 | 26915 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 2e-102 | 381 | BLASTN svg | BLASTP svg |
| NC_002516:1236644* | 1236644 | 1263166 | 26523 | Pseudomonas aeruginosa PAO1, complete genome | 2e-102 | 381 | BLASTN svg | BLASTP svg |
| NC_015410:3791500* | 3791500 | 3812925 | 21426 | Pseudomonas mendocina NK-01 chromosome, complete genome | 9e-102 | 379 | BLASTN svg | BLASTP svg |
| NC_019902:2372097 | 2372097 | 2392858 | 20762 | Thioalkalivibrio nitratireducens DSM 14787, complete genome | 1e-97 | 365 | BLASTN svg | BLASTP svg |
| NC_011770:4591500 | 4591500 | 4609795 | 18296 | Pseudomonas aeruginosa LESB58, complete genome | 3e-95 | 357 | BLASTN svg | BLASTP svg |
| NC_015556:1899850 | 1899850 | 1921838 | 21989 | Pseudomonas fulva 12-X chromosome, complete genome | 3e-92 | 347 | BLASTN svg | BLASTP svg |
| NC_013889:1514799* | 1514799 | 1535427 | 20629 | Thioalkalivibrio sp. K90mix chromosome, complete genome | 7e-81 | 309 | BLASTN svg | BLASTP svg |
| NC_013959:2666321 | 2666321 | 2692608 | 26288 | Sideroxydans lithotrophicus ES-1 chromosome, complete genome | 4e-76 | 293 | BLASTN svg | BLASTP svg |
| NC_005773:4282840* | 4282840 | 4314121 | 31282 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 1e-63 | 252 | BLASTN svg | BLASTP svg |
| NC_019940:1309359 | 1309359 | 1331976 | 22618 | Thioflavicoccus mobilis 8321 chromosome, complete genome | 2e-62 | 248 | BLASTN svg | BLASTP svg |
| NC_011206:2239109 | 2239109 | 2259429 | 20321 | Acidithiobacillus ferrooxidans ATCC 53993, complete genome | 2e-59 | 238 | BLASTN svg | BLASTP svg |
| NC_015850:2147682 | 2147682 | 2179606 | 31925 | Acidithiobacillus caldus SM-1 chromosome, complete genome | 1e-45 | 192 | BLASTN svg | BLASTP svg |
| NC_007925:3911323 | 3911323 | 3933151 | 21829 | Rhodopseudomonas palustris BisB18, complete genome | 4e-42 | 180 | BLASTN svg | BLASTP svg |
| NC_015942:2544407 | 2544407 | 2568352 | 23946 | Acidithiobacillus ferrivorans SS3 chromosome, complete genome | 6e-35 | 157 | BLASTN svg | BLASTP svg |
| NC_012660:5242392 | 5242392 | 5268029 | 25638 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 2e-34 | 155 | BLASTN svg | BLASTP svg |
| NC_014153:436082* | 436082 | 456515 | 20434 | Thiomonas intermedia K12 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |