Query: NC_010612:90890 Mycobacterium marinum M, complete genome
Start: 90890, End: 114750, Length: 23861
Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010612:103081* | 103081 | 135656 | 32576 | Mycobacterium marinum M, complete genome | 0 | 8806 | BLASTN svg | BLASTP svg |
NC_020133:77341 | 77341 | 99270 | 21930 | Mycobacterium liflandii 128FXT, complete genome | 0 | 3854 | BLASTN svg | BLASTP svg |
NC_010612:5626259* | 5626259 | 5645099 | 18841 | Mycobacterium marinum M, complete genome | 0 | 2458 | BLASTN svg | BLASTP svg |
NC_010612:3813481 | 3813481 | 3841145 | 27665 | Mycobacterium marinum M, complete genome | 0 | 2458 | BLASTN svg | BLASTP svg |
NC_008596:421882* | 421882 | 465867 | 43986 | Mycobacterium smegmatis str. MC2 155, complete genome | 6e-35 | 157 | BLASTN svg | BLASTP svg |
NC_002944:4163490 | 4163490 | 4199728 | 36239 | Mycobacterium avium subsp. paratuberculosis K-10, complete genome | 3e-34 | 155 | BLASTN svg | BLASTP svg |
NC_010612:1005778* | 1005778 | 1038805 | 33028 | Mycobacterium marinum M, complete genome | 2e-28 | 135 | BLASTN svg | BLASTP svg |
NC_010612:3745332* | 3745332 | 3781318 | 35987 | Mycobacterium marinum M, complete genome | 2e-28 | 135 | BLASTN svg | BLASTP svg |
NC_013169:1759900* | 1759900 | 1783413 | 23514 | Kytococcus sedentarius DSM 20547, complete genome | 2e-28 | 135 | BLASTN svg | BLASTP svg |
NC_013169:805124 | 805124 | 823664 | 18541 | Kytococcus sedentarius DSM 20547, complete genome | 2e-28 | 135 | BLASTN svg | BLASTP svg |
NC_010612:3969244* | 3969244 | 4014043 | 44800 | Mycobacterium marinum M, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_010397:4150596* | 4150596 | 4181959 | 31364 | Mycobacterium abscessus chromosome Chromosome, complete sequence | 9e-25 | 123 | BLASTN svg | BLASTP svg |
NC_002944:1285436 | 1285436 | 1321324 | 35889 | Mycobacterium avium subsp. paratuberculosis K-10, complete genome | 9e-25 | 123 | BLASTN svg | BLASTP svg |
NC_014215:349917 | 349917 | 379162 | 29246 | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, | 4e-24 | 121 | BLASTN svg | BLASTP svg |
NC_014215:421683 | 421683 | 450909 | 29227 | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, | 4e-24 | 121 | BLASTN svg | BLASTP svg |
NC_014215:492855 | 492855 | 513399 | 20545 | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, | 4e-24 | 121 | BLASTN svg | BLASTP svg |
NC_020133:942375* | 942375 | 965599 | 23225 | Mycobacterium liflandii 128FXT, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_014550:3263783 | 3263783 | 3281599 | 17817 | Arthrobacter arilaitensis Re117, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_002944:1881405 | 1881405 | 1904640 | 23236 | Mycobacterium avium subsp. paratuberculosis K-10, complete genome | 9e-22 | 113 | BLASTN svg | BLASTP svg |
NC_012207:2573562* | 2573562 | 2597329 | 23768 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_020133:2886541* | 2886541 | 2913800 | 27260 | Mycobacterium liflandii 128FXT, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_008611:2615204* | 2615204 | 2636046 | 20843 | Mycobacterium ulcerans Agy99, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_010612:4654936* | 4654936 | 4673126 | 18191 | Mycobacterium marinum M, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_014168:1294000* | 1294000 | 1325342 | 31343 | Segniliparus rotundus DSM 44985 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015957:4525580 | 4525580 | 4556773 | 31194 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_020133:3787844* | 3787844 | 3816465 | 28622 | Mycobacterium liflandii 128FXT, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_013595:7195764 | 7195764 | 7218947 | 23184 | Streptosporangium roseum DSM 43021, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_020156:144707 | 144707 | 192544 | 47838 | Nonlabens dokdonensis DSW-6, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013441:5025444 | 5025444 | 5050599 | 25156 | Gordonia bronchialis DSM 43247, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014839:68308 | 68308 | 93750 | 25443 | Pantoea sp. At-9b plasmid pPAT9B02, complete sequence | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_003155:1137817 | 1137817 | 1202573 | 64757 | Streptomyces avermitilis MA-4680, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |