Pre_GI: BLASTN Hits

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Query: NC_010612:90890 Mycobacterium marinum M, complete genome

Start: 90890, End: 114750, Length: 23861

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010612:103081*10308113565632576Mycobacterium marinum M, complete genome08806BLASTN svgBLASTP svg
NC_020133:77341773419927021930Mycobacterium liflandii 128FXT, complete genome03854BLASTN svgBLASTP svg
NC_010612:5626259*5626259564509918841Mycobacterium marinum M, complete genome02458BLASTN svgBLASTP svg
NC_010612:38134813813481384114527665Mycobacterium marinum M, complete genome02458BLASTN svgBLASTP svg
NC_008596:421882*42188246586743986Mycobacterium smegmatis str. MC2 155, complete genome6e-35157BLASTN svgBLASTP svg
NC_002944:41634904163490419972836239Mycobacterium avium subsp. paratuberculosis K-10, complete genome3e-34155BLASTN svgBLASTP svg
NC_010612:1005778*1005778103880533028Mycobacterium marinum M, complete genome2e-28135BLASTN svgBLASTP svg
NC_010612:3745332*3745332378131835987Mycobacterium marinum M, complete genome2e-28135BLASTN svgBLASTP svg
NC_013169:1759900*1759900178341323514Kytococcus sedentarius DSM 20547, complete genome2e-28135BLASTN svgBLASTP svg
NC_013169:80512480512482366418541Kytococcus sedentarius DSM 20547, complete genome2e-28135BLASTN svgBLASTP svg
NC_010612:3969244*3969244401404344800Mycobacterium marinum M, complete genome2e-25125BLASTN svgBLASTP svg
NC_010397:4150596*4150596418195931364Mycobacterium abscessus chromosome Chromosome, complete sequence9e-25123BLASTN svgBLASTP svg
NC_002944:12854361285436132132435889Mycobacterium avium subsp. paratuberculosis K-10, complete genome9e-25123BLASTN svgBLASTP svg
NC_014215:34991734991737916229246Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,4e-24121BLASTN svgBLASTP svg
NC_014215:42168342168345090929227Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,4e-24121BLASTN svgBLASTP svg
NC_014215:49285549285551339920545Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,4e-24121BLASTN svgBLASTP svg
NC_020133:942375*94237596559923225Mycobacterium liflandii 128FXT, complete genome1e-23119BLASTN svgBLASTP svg
NC_014550:32637833263783328159917817Arthrobacter arilaitensis Re117, complete genome2e-22115BLASTN svgBLASTP svg
NC_002944:18814051881405190464023236Mycobacterium avium subsp. paratuberculosis K-10, complete genome9e-22113BLASTN svgBLASTP svg
NC_012207:2573562*2573562259732923768Mycobacterium bovis BCG str. Tokyo 172, complete genome2e-19105BLASTN svgBLASTP svg
NC_020133:2886541*2886541291380027260Mycobacterium liflandii 128FXT, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_008611:2615204*2615204263604620843Mycobacterium ulcerans Agy99, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010612:4654936*4654936467312618191Mycobacterium marinum M, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014168:1294000*1294000132534231343Segniliparus rotundus DSM 44985 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015957:45255804525580455677331194Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020133:3787844*3787844381646528622Mycobacterium liflandii 128FXT, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013595:71957647195764721894723184Streptosporangium roseum DSM 43021, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020156:14470714470719254447838Nonlabens dokdonensis DSW-6, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013441:50254445025444505059925156Gordonia bronchialis DSM 43247, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014839:68308683089375025443Pantoea sp. At-9b plasmid pPAT9B02, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_003155:11378171137817120257364757Streptomyces avermitilis MA-4680, complete genome3e-0661.9BLASTN svgBLASTP svg