Pre_GI: BLASTN Hits

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Query: NC_010612:681544 Mycobacterium marinum M, complete genome

Start: 681544, End: 704563, Length: 23020

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002944:42540114254011427748823478Mycobacterium avium subsp. paratuberculosis K-10, complete genome2e-105391BLASTN svgBLASTP svg
NC_012522:58959465895946592393127986Rhodococcus opacus B4, complete genome6e-75289BLASTN svgBLASTP svg
NC_014814:48344448344450236518922Mycobacterium sp. Spyr1 chromosome, complete genome2e-65258BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome6e-35157BLASTN svgBLASTP svg
NC_010397:43875004387500440592818429Mycobacterium abscessus chromosome Chromosome, complete sequence1e-32149BLASTN svgBLASTP svg
NC_014666:300571*30057132924028670Frankia sp. EuI1c chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_014210:53708685370868538907818211Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,8e-22113BLASTN svgBLASTP svg
NC_003155:5443230*5443230546350520276Streptomyces avermitilis MA-4680, complete genome8e-19103BLASTN svgBLASTP svg
NC_013595:89189789189791154419648Streptosporangium roseum DSM 43021, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_013510:262888*26288828309920212Thermomonospora curvata DSM 43183, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008705:27434*274345721729784Mycobacterium sp. KMS, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008146:20047*200475317433128Mycobacterium sp. MCS, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010407:31744703174470319754523076Clavibacter michiganensis subsp. sepedonicus chromosome, complete1e-1489.7BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_006087:24392522439252246595526704Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_018750:37415813741581376849826918Streptomyces venezuelae ATCC 10712, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011901:3363500*3363500338699623497Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_008343:88184*8818411285024667Granulibacter bethesdensis CGDNIH1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020064:3825916*3825916385292327008Serratia marcescens FGI94, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_004547:843475*84347586442120947Erwinia carotovora subsp. atroseptica SCRI1043, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014246:65180165180167409922299Mobiluncus curtisii ATCC 43063 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008261:2770468*2770468279579025323Clostridium perfringens ATCC 13124, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008262:2433979*2433979246848234504Clostridium perfringens SM101, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008825:25649652564965258966024696Methylibium petroleiphilum PM1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015138:30224143022414304672924316Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_015957:19600019600021778021781Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015725:743567*74356776609922533Mycoplasma bovis Hubei-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014932:985882*985882103391148030Bartonella clarridgeiae 73, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012587:1203103*1203103122551622414Rhizobium sp. NGR234, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006526:12020001202000121991217913Zymomonas mobilis subsp. mobilis ZM4, complete genome3e-0661.9BLASTN svgBLASTP svg