Query: NC_010501:4787963 Pseudomonas putida W619, complete genome
Start: 4787963, End: 4807286, Length: 19324
Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_007492:5214709* | 5214709 | 5241684 | 26976 | Pseudomonas fluorescens PfO-1, complete genome | 0 | 1913 | BLASTN svg | BLASTP svg |
NC_015379:1151143* | 1151143 | 1182795 | 31653 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 0 | 1865 | BLASTN svg | BLASTP svg |
NC_004129:5723787* | 5723787 | 5758179 | 34393 | Pseudomonas fluorescens Pf-5, complete genome | 0 | 1752 | BLASTN svg | BLASTP svg |
NC_012660:5571500* | 5571500 | 5599599 | 28100 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 0 | 1643 | BLASTN svg | BLASTP svg |
NC_007492:2771021 | 2771021 | 2802048 | 31028 | Pseudomonas fluorescens PfO-1, complete genome | 4e-131 | 476 | BLASTN svg | BLASTP svg |
NC_009439:3535152 | 3535152 | 3555614 | 20463 | Pseudomonas mendocina ymp, complete genome | 4e-119 | 436 | BLASTN svg | BLASTP svg |
NC_021150:1965264 | 1965264 | 1988875 | 23612 | Azotobacter vinelandii CA6, complete genome | 3e-98 | 367 | BLASTN svg | BLASTP svg |
NC_012560:1965251 | 1965251 | 1988862 | 23612 | Azotobacter vinelandii DJ, complete genome | 3e-98 | 367 | BLASTN svg | BLASTP svg |
NC_007492:3180480 | 3180480 | 3234740 | 54261 | Pseudomonas fluorescens PfO-1, complete genome | 4e-82 | 313 | BLASTN svg | BLASTP svg |
NC_012560:3282704 | 3282704 | 3300852 | 18149 | Azotobacter vinelandii DJ, complete genome | 2e-40 | 174 | BLASTN svg | BLASTP svg |
NC_021150:3282702 | 3282702 | 3300850 | 18149 | Azotobacter vinelandii CA6, complete genome | 2e-40 | 174 | BLASTN svg | BLASTP svg |
NC_007508:3034718* | 3034718 | 3056155 | 21438 | Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_009512:755658* | 755658 | 782723 | 27066 | Pseudomonas putida F1, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_008789:1837493* | 1837493 | 1856164 | 18672 | Halorhodospira halophila SL1, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_013889:1382705* | 1382705 | 1409939 | 27235 | Thioalkalivibrio sp. K90mix chromosome, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_011770:1456667 | 1456667 | 1478224 | 21558 | Pseudomonas aeruginosa LESB58, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013222:299683* | 299683 | 380365 | 80683 | Robiginitalea biformata HTCC2501, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007760:535825 | 535825 | 559277 | 23453 | Anaeromyxobacter dehalogenans 2CP-C, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010334:835500 | 835500 | 855193 | 19694 | Shewanella halifaxensis HAW-EB4, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014008:1552679* | 1552679 | 1571617 | 18939 | Coraliomargarita akajimensis DSM 45221 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |