Pre_GI: BLASTN Hits

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Query: NC_010501:4787963 Pseudomonas putida W619, complete genome

Start: 4787963, End: 4807286, Length: 19324

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007492:5214709*5214709524168426976Pseudomonas fluorescens PfO-1, complete genome01913BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,01865BLASTN svgBLASTP svg
NC_004129:5723787*5723787575817934393Pseudomonas fluorescens Pf-5, complete genome01752BLASTN svgBLASTP svg
NC_012660:5571500*5571500559959928100Pseudomonas fluorescens SBW25 chromosome, complete genome01643BLASTN svgBLASTP svg
NC_007492:27710212771021280204831028Pseudomonas fluorescens PfO-1, complete genome4e-131476BLASTN svgBLASTP svg
NC_009439:35351523535152355561420463Pseudomonas mendocina ymp, complete genome4e-119436BLASTN svgBLASTP svg
NC_021150:19652641965264198887523612Azotobacter vinelandii CA6, complete genome3e-98367BLASTN svgBLASTP svg
NC_012560:19652511965251198886223612Azotobacter vinelandii DJ, complete genome3e-98367BLASTN svgBLASTP svg
NC_007492:31804803180480323474054261Pseudomonas fluorescens PfO-1, complete genome4e-82313BLASTN svgBLASTP svg
NC_012560:32827043282704330085218149Azotobacter vinelandii DJ, complete genome2e-40174BLASTN svgBLASTP svg
NC_021150:32827023282702330085018149Azotobacter vinelandii CA6, complete genome2e-40174BLASTN svgBLASTP svg
NC_007508:3034718*3034718305615521438Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-22115BLASTN svgBLASTP svg
NC_009512:755658*75565878272327066Pseudomonas putida F1, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008789:1837493*1837493185616418672Halorhodospira halophila SL1, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_013889:1382705*1382705140993927235Thioalkalivibrio sp. K90mix chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_011770:14566671456667147822421558Pseudomonas aeruginosa LESB58, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013222:299683*29968338036580683Robiginitalea biformata HTCC2501, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007760:53582553582555927723453Anaeromyxobacter dehalogenans 2CP-C, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010334:83550083550085519319694Shewanella halifaxensis HAW-EB4, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014008:1552679*1552679157161718939Coraliomargarita akajimensis DSM 45221 chromosome, complete genome9e-0660BLASTN svgBLASTP svg