Pre_GI: BLASTN Hits

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Query: NC_010501:4311873 Pseudomonas putida W619, complete genome

Start: 4311873, End: 4334340, Length: 22468

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010501:27960002796000281869522696Pseudomonas putida W619, complete genome01927BLASTN svgBLASTP svg
NC_002947:34923793492379351709924721Pseudomonas putida KT2440, complete genome01221BLASTN svgBLASTP svg
NC_015733:1793399*1793399181802124623Pseudomonas putida S16 chromosome, complete genome0837BLASTN svgBLASTP svg
NC_002516:23067762306776232728720512Pseudomonas aeruginosa PAO1, complete genome6e-103383BLASTN svgBLASTP svg
NC_007005:1738500*1738500176475226253Pseudomonas syringae pv. syringae B728a, complete genome6e-72280BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome2e-50208BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome4e-48200BLASTN svgBLASTP svg
NC_004578:44329834432983445709924117Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-42180BLASTN svgBLASTP svg
NC_005773:57347335734733576109926367Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-41176BLASTN svgBLASTP svg
NC_007005:58822055882205592100338799Pseudomonas syringae pv. syringae B728a, complete genome1e-39172BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome9e-34153BLASTN svgBLASTP svg
NC_005773:16757931675793169861222820Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-29137BLASTN svgBLASTP svg
NC_015379:67145456714545674216027616Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-1797.6BLASTN svgBLASTP svg
NC_020209:46439014643901466711323213Pseudomonas poae RE*1-1-14, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002947:46045824604582462867624095Pseudomonas putida KT2440, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015138:21101492110149213484224694Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_007384:27881027881029760818799Shigella sonnei Ss046, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019973:2417000*2417000243959922600Mesorhizobium australicum WSM2073, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008752:36847393684739371824933511Acidovorax avenae subsp. citrulli AAC00-1, complete genome3e-0661.9BLASTN svgBLASTP svg