Pre_GI: BLASTN Hits

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Query: NC_010475:2188827 Synechococcus sp. PCC 7002, complete genome

Start: 2188827, End: 2214861, Length: 26035

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011884:18218621821862184406822207Cyanothece sp. PCC 7425, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014363:8228*82283606827841Olsenella uli DSM 7084 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009050:567209*56720959401626808Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_007494:1*12004420044Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_013739:5705325*5705325573909933775Conexibacter woesei DSM 14684, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014221:78500*7850010313624637Truepera radiovictrix DSM 17093 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_020210:2969862*2969862300083330972Geobacillus sp. GHH01, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014915:3039639*3039639305859918961Geobacillus sp. Y412MC52 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010718:304440*30444032660422165Natranaerobius thermophilus JW/NM-WN-LF, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008043:615049*61504964350028452Silicibacter sp. TM1040 mega plasmid, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_014933:2240000*2240000226386823869Bacteroides helcogenes P 36-108 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015161:162000*16200018601224013Deinococcus proteolyticus MRP chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_000964:521975*52197556193339959Bacillus subtilis subsp. subtilis str. 168, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006322:567987*56798759617928193Bacillus licheniformis ATCC 14580, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006582:883922*88392291459930678Bacillus clausii KSM-K16, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009725:496443*49644354991253470Bacillus amyloliquefaciens FZB42, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010673:479552*47955250738827837Borrelia hermsii DAH, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014479:509919*50991953986229944Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_014551:483773*48377350659922827Bacillus amyloliquefaciens DSM 7, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_016047:637778*63777866096423187Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_019896:3491000*3491000352473533736Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_019842:484933*48493354277857846Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,8e-0763.9BLASTN svgBLASTP svg
NC_006270:568171*56817159638928219Bacillus licheniformis ATCC 14580, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_020410:495184*49518454162646443Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete8e-0763.9BLASTN svgBLASTP svg
NC_020244:516993*51699355115334161Bacillus subtilis XF-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_002179:66718266718268743020249Chlamydophila pneumoniae AR39, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002491:15632515632517436718043Chlamydophila pneumoniae J138, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008358:1861505*1861505188413422630Hyphomonas neptunium ATCC 15444, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008576:777949*77794980025522307Magnetococcus sp. MC-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009049:1934398*1934398196979735400Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_009952:1984955*1984955201717932225Dinoroseobacter shibae DFL 12, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015277:3351504*3351504337700525502Sphingobacterium sp. 21 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015277:6213304*6213304624149928196Sphingobacterium sp. 21 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_001318:479709*47970950779828090Borrelia burgdorferi B31, complete genome3e-0661.9BLASTN svgBLASTP svg