Query: NC_010102:931055 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,
Start: 931055, End: 954142, Length: 23088
Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_006905:1342474 | 1342474 | 1378111 | 35638 | Salmonella enterica subsp. enterica serovar Choleraesuis str | 2e-143 | 517 | BLASTN svg | BLASTP svg |
NC_010102:1137247 | 1137247 | 1162987 | 25741 | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, | 2e-59 | 238 | BLASTN svg | BLASTP svg |
NC_006511:1063249 | 1063249 | 1086599 | 23351 | Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC | 2e-59 | 238 | BLASTN svg | BLASTP svg |
NC_015663:4950000 | 4950000 | 5019917 | 69918 | Enterobacter aerogenes KCTC 2190 chromosome, complete genome | 8e-59 | 236 | BLASTN svg | BLASTP svg |
NC_011080:1166951 | 1166951 | 1193309 | 26359 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 4e-42 | 180 | BLASTN svg | BLASTP svg |
NC_003198:4453457 | 4453457 | 4507730 | 54274 | Salmonella enterica subsp. enterica serovar Typhi str. CT18, | 3e-37 | 165 | BLASTN svg | BLASTP svg |
NC_010102:1829357 | 1829357 | 1854176 | 24820 | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, | 8e-22 | 113 | BLASTN svg | BLASTP svg |
NC_010102:1779707 | 1779707 | 1811583 | 31877 | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, | 8e-22 | 113 | BLASTN svg | BLASTP svg |
NC_003198:1867456 | 1867456 | 1893391 | 25936 | Salmonella enterica subsp. enterica serovar Typhi str. CT18, | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_014306:3210311 | 3210311 | 3257128 | 46818 | Erwinia billingiae Eb661, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_011740:2072173 | 2072173 | 2114137 | 41965 | Escherichia fergusonii ATCC 35469, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_010067:892729* | 892729 | 925238 | 32510 | Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_010067:2529750 | 2529750 | 2594354 | 64605 | Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_012779:2957000 | 2957000 | 2984039 | 27040 | Edwardsiella ictaluri 93-146, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
CU928160:2715246* | 2715246 | 2740205 | 24960 | Escherichia coli IAI1 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015663:1 | 1 | 37971 | 37971 | Enterobacter aerogenes KCTC 2190 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_013956:3273340 | 3273340 | 3303801 | 30462 | Pantoea ananatis LMG 20103 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_011149:1236689* | 1236689 | 1256099 | 19411 | Salmonella enterica subsp. enterica serovar Agona str. SL483, | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |