Pre_GI: BLASTN Hits

Some Help

Query: NC_009831:5107924 Shewanella sediminis HAW-EB3, complete genome

Start: 5107924, End: 5127733, Length: 19810

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010506:53783353783356188024048Shewanella woodyi ATCC 51908, complete genome01725BLASTN svgBLASTP svg
NC_004347:45417424541742456611624375Shewanella oneidensis MR-1, complete genome7e-59236BLASTN svgBLASTP svg
NC_008577:61395861395863310219145Shewanella sp. ANA-3 chromosome 1, complete sequence4e-1487.7BLASTN svgBLASTP svg
NC_005810:3493607*3493607351772924123Yersinia pestis biovar Microtus str. 91001, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_010688:38700038700041036023361Xanthomonas campestris pv. campestris, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_006155:17231317231319559923287Yersinia pseudotuberculosis IP 32953, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010634:16690016690019017923280Yersinia pseudotuberculosis PB1/+, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014013:301184*30118432635025167Sphingobium japonicum UT26S chromosome 2, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_018750:3481476*3481476351379932324Streptomyces venezuelae ATCC 10712, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010617:26398526398528723123247Kocuria rhizophila DC2201, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003902:39600039600042428128282Xanthomonas campestris pv. campestris str. ATCC 33913, complete4e-1177.8BLASTN svgBLASTP svg
NC_004307:2208591*2208591223691728327Bifidobacterium longum NCC2705, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007086:39672339672342172325001Xanthomonas campestris pv. campestris str. 8004, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010816:2326453*2326453235368827236Bifidobacterium longum DJO10A, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014762:2428721*2428721245871529995Sulfuricurvum kujiense DSM 16994 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015052:1771976*1771976180028328308Bifidobacterium longum subsp. infantis 157F, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014623:2475598*2475598249759922002Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006138:799174*79917482759928426Desulfotalea psychrophila LSv54, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014550:14870621487062150515118090Arthrobacter arilaitensis Re117, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009648:4656187*4656187467706020874Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_011184:2840713*2840713285859917887Vibrio fischeri MJ11 chromosome I, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_010611:3879190*3879190390849929310Acinetobacter baumannii ACICU, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010410:11201*112013349022290Acinetobacter baumannii AYE, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014909:662500*66250068970227203Candidatus Blochmannia vafer str. BVAF chromosome, complete genome9e-0660BLASTN svgBLASTP svg