Query: NC_009831:5107924 Shewanella sediminis HAW-EB3, complete genome
Start: 5107924, End: 5127733, Length: 19810
Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010506:537833 | 537833 | 561880 | 24048 | Shewanella woodyi ATCC 51908, complete genome | 0 | 1725 | BLASTN svg | BLASTP svg |
NC_004347:4541742 | 4541742 | 4566116 | 24375 | Shewanella oneidensis MR-1, complete genome | 7e-59 | 236 | BLASTN svg | BLASTP svg |
NC_008577:613958 | 613958 | 633102 | 19145 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_005810:3493607* | 3493607 | 3517729 | 24123 | Yersinia pestis biovar Microtus str. 91001, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_010688:387000 | 387000 | 410360 | 23361 | Xanthomonas campestris pv. campestris, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_006155:172313 | 172313 | 195599 | 23287 | Yersinia pseudotuberculosis IP 32953, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010634:166900 | 166900 | 190179 | 23280 | Yersinia pseudotuberculosis PB1/+, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_014013:301184* | 301184 | 326350 | 25167 | Sphingobium japonicum UT26S chromosome 2, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_018750:3481476* | 3481476 | 3513799 | 32324 | Streptomyces venezuelae ATCC 10712, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010617:263985 | 263985 | 287231 | 23247 | Kocuria rhizophila DC2201, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_003902:396000 | 396000 | 424281 | 28282 | Xanthomonas campestris pv. campestris str. ATCC 33913, complete | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_004307:2208591* | 2208591 | 2236917 | 28327 | Bifidobacterium longum NCC2705, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007086:396723 | 396723 | 421723 | 25001 | Xanthomonas campestris pv. campestris str. 8004, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010816:2326453* | 2326453 | 2353688 | 27236 | Bifidobacterium longum DJO10A, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014762:2428721* | 2428721 | 2458715 | 29995 | Sulfuricurvum kujiense DSM 16994 chromosome, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015052:1771976* | 1771976 | 1800283 | 28308 | Bifidobacterium longum subsp. infantis 157F, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014623:2475598* | 2475598 | 2497599 | 22002 | Stigmatella aurantiaca DW4/3-1 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_006138:799174* | 799174 | 827599 | 28426 | Desulfotalea psychrophila LSv54, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_014550:1487062 | 1487062 | 1505151 | 18090 | Arthrobacter arilaitensis Re117, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_009648:4656187* | 4656187 | 4677060 | 20874 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_011184:2840713* | 2840713 | 2858599 | 17887 | Vibrio fischeri MJ11 chromosome I, complete sequence | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010611:3879190* | 3879190 | 3908499 | 29310 | Acinetobacter baumannii ACICU, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010410:11201* | 11201 | 33490 | 22290 | Acinetobacter baumannii AYE, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014909:662500* | 662500 | 689702 | 27203 | Candidatus Blochmannia vafer str. BVAF chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |