Query: NC_009831:4539952 Shewanella sediminis HAW-EB3, complete genome
Start: 4539952, End: 4580028, Length: 40077
Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010506:4951500 | 4951500 | 4973150 | 21651 | Shewanella woodyi ATCC 51908, complete genome | 0 | 892 | BLASTN svg | BLASTP svg |
NC_008322:3758500 | 3758500 | 3780501 | 22002 | Shewanella sp. MR-7, complete genome | 2e-131 | 478 | BLASTN svg | BLASTP svg |
NC_008321:977500 | 977500 | 999795 | 22296 | Shewanella sp. MR-4, complete genome | 1e-114 | 422 | BLASTN svg | BLASTP svg |
NC_004347:1038253* | 1038253 | 1070537 | 32285 | Shewanella oneidensis MR-1, complete genome | 2e-98 | 369 | BLASTN svg | BLASTP svg |
NC_010334:2131939* | 2131939 | 2158482 | 26544 | Shewanella halifaxensis HAW-EB4, complete genome | 4e-68 | 268 | BLASTN svg | BLASTP svg |
NC_009831:66518 | 66518 | 89521 | 23004 | Shewanella sediminis HAW-EB3, complete genome | 1e-65 | 260 | BLASTN svg | BLASTP svg |
NC_013851:1866523* | 1866523 | 1888928 | 22406 | Allochromatium vinosum DSM 180 chromosome, complete genome | 5e-52 | 214 | BLASTN svg | BLASTP svg |
NC_015138:272500 | 272500 | 295660 | 23161 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 3e-44 | 188 | BLASTN svg | BLASTP svg |
NC_011753:1680738 | 1680738 | 1700749 | 20012 | Vibrio splendidus LGP32 chromosome 1, complete genome | 1e-28 | 137 | BLASTN svg | BLASTP svg |
NC_008702:4064470 | 4064470 | 4092113 | 27644 | Azoarcus sp. BH72, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
NC_008786:18688 | 18688 | 42623 | 23936 | Verminephrobacter eiseniae EF01-2, complete genome | 1e-24 | 123 | BLASTN svg | BLASTP svg |
NC_009831:4447919 | 4447919 | 4471909 | 23991 | Shewanella sediminis HAW-EB3, complete genome | 9e-23 | 117 | BLASTN svg | BLASTP svg |
NC_009092:3732390 | 3732390 | 3755532 | 23143 | Shewanella loihica PV-4, complete genome | 9e-20 | 107 | BLASTN svg | BLASTP svg |
NC_014666:3629696 | 3629696 | 3649099 | 19404 | Frankia sp. EuI1c chromosome, complete genome | 5e-18 | 101 | BLASTN svg | BLASTP svg |
NC_003047:3202125* | 3202125 | 3229127 | 27003 | Sinorhizobium meliloti 1021, complete genome | 9e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_010506:1893000 | 1893000 | 1912729 | 19730 | Shewanella woodyi ATCC 51908, complete genome | 9e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_010162:10764788* | 10764788 | 10789550 | 24763 | Sorangium cellulosum 'So ce 56', complete genome | 3e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_004463:1520303* | 1520303 | 1548020 | 27718 | Bradyrhizobium japonicum USDA 110, complete genome | 5e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_012489:652319 | 652319 | 690388 | 38070 | Gemmatimonas aurantiaca T-27, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_009901:2272206 | 2272206 | 2309985 | 37780 | Shewanella pealeana ATCC 700345, complete genome | 8e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014541:1414627 | 1414627 | 1443613 | 28987 | Ferrimonas balearica DSM 9799 chromosome, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007777:135222* | 135222 | 165908 | 30687 | Frankia sp. CcI3, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_013960:2592389 | 2592389 | 2611815 | 19427 | Nitrosococcus halophilus Nc4 chromosome, complete genome | 8e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008700:2701500* | 2701500 | 2738900 | 37401 | Shewanella amazonensis SB2B, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008571:365047 | 365047 | 387352 | 22306 | Gramella forsetii KT0803, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008322:641197* | 641197 | 666985 | 25789 | Shewanella sp. MR-7, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004347:718091 | 718091 | 757399 | 39309 | Shewanella oneidensis MR-1, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004347:4211241* | 4211241 | 4236439 | 25199 | Shewanella oneidensis MR-1, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |