Pre_GI: BLASTN Hits

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Query: NC_009831:4539952 Shewanella sediminis HAW-EB3, complete genome

Start: 4539952, End: 4580028, Length: 40077

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010506:49515004951500497315021651Shewanella woodyi ATCC 51908, complete genome0892BLASTN svgBLASTP svg
NC_008322:37585003758500378050122002Shewanella sp. MR-7, complete genome2e-131478BLASTN svgBLASTP svg
NC_008321:97750097750099979522296Shewanella sp. MR-4, complete genome1e-114422BLASTN svgBLASTP svg
NC_004347:1038253*1038253107053732285Shewanella oneidensis MR-1, complete genome2e-98369BLASTN svgBLASTP svg
NC_010334:2131939*2131939215848226544Shewanella halifaxensis HAW-EB4, complete genome4e-68268BLASTN svgBLASTP svg
NC_009831:66518665188952123004Shewanella sediminis HAW-EB3, complete genome1e-65260BLASTN svgBLASTP svg
NC_013851:1866523*1866523188892822406Allochromatium vinosum DSM 180 chromosome, complete genome5e-52214BLASTN svgBLASTP svg
NC_015138:27250027250029566023161Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-44188BLASTN svgBLASTP svg
NC_011753:16807381680738170074920012Vibrio splendidus LGP32 chromosome 1, complete genome1e-28137BLASTN svgBLASTP svg
NC_008702:40644704064470409211327644Azoarcus sp. BH72, complete genome2e-26129BLASTN svgBLASTP svg
NC_008786:18688186884262323936Verminephrobacter eiseniae EF01-2, complete genome1e-24123BLASTN svgBLASTP svg
NC_009831:44479194447919447190923991Shewanella sediminis HAW-EB3, complete genome9e-23117BLASTN svgBLASTP svg
NC_009092:37323903732390375553223143Shewanella loihica PV-4, complete genome9e-20107BLASTN svgBLASTP svg
NC_014666:36296963629696364909919404Frankia sp. EuI1c chromosome, complete genome5e-18101BLASTN svgBLASTP svg
NC_003047:3202125*3202125322912727003Sinorhizobium meliloti 1021, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_010506:18930001893000191272919730Shewanella woodyi ATCC 51908, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_010162:10764788*107647881078955024763Sorangium cellulosum 'So ce 56', complete genome3e-1695.6BLASTN svgBLASTP svg
NC_004463:1520303*1520303154802027718Bradyrhizobium japonicum USDA 110, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_012489:65231965231969038838070Gemmatimonas aurantiaca T-27, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_009901:22722062272206230998537780Shewanella pealeana ATCC 700345, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_014541:14146271414627144361328987Ferrimonas balearica DSM 9799 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_007777:135222*13522216590830687Frankia sp. CcI3, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_013960:25923892592389261181519427Nitrosococcus halophilus Nc4 chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_008700:2701500*2701500273890037401Shewanella amazonensis SB2B, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008571:36504736504738735222306Gramella forsetii KT0803, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008322:641197*64119766698525789Shewanella sp. MR-7, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_004347:4211241*4211241423643925199Shewanella oneidensis MR-1, complete genome5e-0661.9BLASTN svgBLASTP svg