Query: NC_009831:3583856 Shewanella sediminis HAW-EB3, complete genome
Start: 3583856, End: 3606009, Length: 22154
Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_009831:3612206 | 3612206 | 3654039 | 41834 | Shewanella sediminis HAW-EB3, complete genome | 0 | 1501 | BLASTN svg | BLASTP svg |
| NC_009092:1599526 | 1599526 | 1644864 | 45339 | Shewanella loihica PV-4, complete genome | 4e-119 | 436 | BLASTN svg | BLASTP svg |
| NC_013166:961431 | 961431 | 983779 | 22349 | Kangiella koreensis DSM 16069, complete genome | 4e-30 | 141 | BLASTN svg | BLASTP svg |
| NC_021150:1258780* | 1258780 | 1277368 | 18589 | Azotobacter vinelandii CA6, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
| NC_012560:1260031* | 1260031 | 1292431 | 32401 | Azotobacter vinelandii DJ, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
| NC_014562:2563466* | 2563466 | 2612484 | 49019 | Pantoea vagans C9-1 chromosome, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
| NC_015740:1017000* | 1017000 | 1040617 | 23618 | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete | 8e-25 | 123 | BLASTN svg | BLASTP svg |
| NC_009434:1156834* | 1156834 | 1175184 | 18351 | Pseudomonas stutzeri A1501, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
| NC_014532:1579419 | 1579419 | 1620134 | 40716 | Halomonas elongata DSM 2581, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
| NC_008700:2701500* | 2701500 | 2738900 | 37401 | Shewanella amazonensis SB2B, complete genome | 8e-22 | 113 | BLASTN svg | BLASTP svg |
| NC_009800:2889928 | 2889928 | 2912099 | 22172 | Escherichia coli HS, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
| NC_007963:1908964 | 1908964 | 1934443 | 25480 | Chromohalobacter salexigens DSM 3043, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| AC_000091:2872000 | 2872000 | 2896526 | 24527 | Escherichia coli W3110 DNA, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_000913:2873443 | 2873443 | 2892201 | 18759 | Escherichia coli K12, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_010468:1029471* | 1029471 | 1054991 | 25521 | Escherichia coli ATCC 8739, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_010473:2963951 | 2963951 | 2988434 | 24484 | Escherichia coli str. K-12 substr. DH10B, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_018868:569423* | 569423 | 619044 | 49622 | Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_013850:985331 | 985331 | 1007420 | 22090 | Klebsiella variicola At-22 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_016002:2946702* | 2946702 | 2993761 | 47060 | Pseudogulbenkiania sp. NH8B, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_009654:894492 | 894492 | 912906 | 18415 | Marinomonas sp. MWYL1, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_008345:3394154* | 3394154 | 3418322 | 24169 | Shewanella frigidimarina NCIMB 400, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_018419:226000 | 226000 | 248099 | 22100 | Secondary endosymbiont of Ctenarytaina eucalypti chromosome, | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_007969:726086 | 726086 | 754765 | 28680 | Psychrobacter cryohalolentis K5, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_015379:1887275* | 1887275 | 1918545 | 31271 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011566:1597751 | 1597751 | 1627838 | 30088 | Shewanella piezotolerans WP3, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014228:3353896 | 3353896 | 3385445 | 31550 | Xenorhabdus nematophila ATCC 19061, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_012791:2052923 | 2052923 | 2084976 | 32054 | Variovorax paradoxus S110 chromosome 1, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |