Pre_GI: BLASTN Hits

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Query: NC_009831:1539159 Shewanella sediminis HAW-EB3, complete genome

Start: 1539159, End: 1561099, Length: 21941

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013592:3618248*3618248363709918852Dickeya dadantii Ech586, complete genome8e-93349BLASTN svgBLASTP svg
NC_013421:11730511173051120171028660Pectobacterium wasabiae WPP163, complete genome3e-92347BLASTN svgBLASTP svg
NC_012880:1127997*1127997115596427968Dickeya dadantii Ech703, complete genome3e-83317BLASTN svgBLASTP svg
NC_010694:2971170*2971170300344632277Erwinia tasmaniensis, complete genome3e-49204BLASTN svgBLASTP svg
NC_014562:2563466*2563466261248449019Pantoea vagans C9-1 chromosome, complete genome8e-28133BLASTN svgBLASTP svg
NC_013961:851044*85104488459933556Erwinia amylovora, complete genome3e-27131BLASTN svgBLASTP svg
NC_010995:2547164*2547164256843021267Cellvibrio japonicus Ueda107, complete genome8e-25123BLASTN svgBLASTP svg
NC_015733:13980831398083142324125159Pseudomonas putida S16 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_014733:2201485*2201485222586124377Methylovorus sp. MP688 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_008095:16971571697157172169424538Myxococcus xanthus DK 1622, complete genome8e-19103BLASTN svgBLASTP svg
NC_009439:44289044289048900846119Pseudomonas mendocina ymp, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014932:985882*985882103391148030Bartonella clarridgeiae 73, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004578:1719849*1719849174221722369Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012751:1538500*1538500155962621127Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete1e-1179.8BLASTN svgBLASTP svg
NC_020300:960692*96069297958218891Bartonella australis Aust/NH1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008253:28285732828573285250723935Escherichia coli 536, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015696:105748*10574812926823521Francisella sp. TX077308 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007984:22103022103024292321894Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete3e-0971.9BLASTN svgBLASTP svg
NC_010336:733751*73375175293719187Francisella philomiragia subsp. philomiragia ATCC 25017, complete1e-0869.9BLASTN svgBLASTP svg
NC_005955:947500*94750097976232263Bartonella quintana str. Toulouse, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006350:845513*84551390754062028Burkholderia pseudomallei K96243 chromosome 1, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_007434:10015141001514102437922866Burkholderia pseudomallei 1710b chromosome I, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_009076:77940777940780317023764Burkholderia pseudomallei 1106a chromosome I, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_009801:30138383013838304465430817Escherichia coli E24377A, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010804:28086762808676283109922424Burkholderia multivorans ATCC 17616 chromosome 1, complete4e-0867.9BLASTN svgBLASTP svg
NC_013416:16493*164933535418862Aggregatibacter actinomycetemcomitans D11S-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008312:5579819*5579819560530425486Trichodesmium erythraeum IMS101, complete genome3e-0661.9BLASTN svgBLASTP svg