Query: NC_009831:1539159 Shewanella sediminis HAW-EB3, complete genome
Start: 1539159, End: 1561099, Length: 21941
Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_013592:3618248* | 3618248 | 3637099 | 18852 | Dickeya dadantii Ech586, complete genome | 8e-93 | 349 | BLASTN svg | BLASTP svg |
NC_013421:1173051 | 1173051 | 1201710 | 28660 | Pectobacterium wasabiae WPP163, complete genome | 3e-92 | 347 | BLASTN svg | BLASTP svg |
NC_012880:1127997* | 1127997 | 1155964 | 27968 | Dickeya dadantii Ech703, complete genome | 3e-83 | 317 | BLASTN svg | BLASTP svg |
NC_010694:2971170* | 2971170 | 3003446 | 32277 | Erwinia tasmaniensis, complete genome | 3e-49 | 204 | BLASTN svg | BLASTP svg |
NC_014562:2563466* | 2563466 | 2612484 | 49019 | Pantoea vagans C9-1 chromosome, complete genome | 8e-28 | 133 | BLASTN svg | BLASTP svg |
NC_013961:851044* | 851044 | 884599 | 33556 | Erwinia amylovora, complete genome | 3e-27 | 131 | BLASTN svg | BLASTP svg |
NC_010995:2547164* | 2547164 | 2568430 | 21267 | Cellvibrio japonicus Ueda107, complete genome | 8e-25 | 123 | BLASTN svg | BLASTP svg |
NC_015733:1398083 | 1398083 | 1423241 | 25159 | Pseudomonas putida S16 chromosome, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_014733:2201485* | 2201485 | 2225861 | 24377 | Methylovorus sp. MP688 chromosome, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_008095:1697157 | 1697157 | 1721694 | 24538 | Myxococcus xanthus DK 1622, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_009439:442890 | 442890 | 489008 | 46119 | Pseudomonas mendocina ymp, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_014932:985882* | 985882 | 1033911 | 48030 | Bartonella clarridgeiae 73, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_004578:1719849* | 1719849 | 1742217 | 22369 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_012751:1538500* | 1538500 | 1559626 | 21127 | Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_020300:960692* | 960692 | 979582 | 18891 | Bartonella australis Aust/NH1, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_008253:2828573 | 2828573 | 2852507 | 23935 | Escherichia coli 536, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015696:105748* | 105748 | 129268 | 23521 | Francisella sp. TX077308 chromosome, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_007984:221030 | 221030 | 242923 | 21894 | Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010336:733751* | 733751 | 752937 | 19187 | Francisella philomiragia subsp. philomiragia ATCC 25017, complete | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_005955:947500* | 947500 | 979762 | 32263 | Bartonella quintana str. Toulouse, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_006350:845513* | 845513 | 907540 | 62028 | Burkholderia pseudomallei K96243 chromosome 1, complete sequence | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007434:1001514 | 1001514 | 1024379 | 22866 | Burkholderia pseudomallei 1710b chromosome I, complete sequence | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009076:779407 | 779407 | 803170 | 23764 | Burkholderia pseudomallei 1106a chromosome I, complete sequence | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009801:3013838 | 3013838 | 3044654 | 30817 | Escherichia coli E24377A, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010804:2808676 | 2808676 | 2831099 | 22424 | Burkholderia multivorans ATCC 17616 chromosome 1, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013416:16493* | 16493 | 35354 | 18862 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008312:5579819* | 5579819 | 5605304 | 25486 | Trichodesmium erythraeum IMS101, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |