Query: NC_009664:1195630 Kineococcus radiotolerans SRS30216, complete genome
Start: 1195630, End: 1226374, Length: 30745
Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008268:6149576* | 6149576 | 6176842 | 27267 | Rhodococcus sp. RHA1, complete genome | 1e-33 | 153 | BLASTN svg | BLASTP svg |
NC_004369:1051013* | 1051013 | 1073859 | 22847 | Corynebacterium efficiens YS-314, complete genome | 3e-31 | 145 | BLASTN svg | BLASTP svg |
NC_009664:3245210 | 3245210 | 3266817 | 21608 | Kineococcus radiotolerans SRS30216, complete genome | 8e-29 | 137 | BLASTN svg | BLASTP svg |
NC_014550:889500 | 889500 | 915783 | 26284 | Arthrobacter arilaitensis Re117, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
NC_018750:7913600 | 7913600 | 7932647 | 19048 | Streptomyces venezuelae ATCC 10712, complete genome | 1e-18 | 103 | BLASTN svg | BLASTP svg |
NC_002945:1856228 | 1856228 | 1880738 | 24511 | Mycobacterium bovis AF2122/97, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_008769:1876109 | 1876109 | 1900616 | 24508 | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_009525:1872360 | 1872360 | 1896860 | 24501 | Mycobacterium tuberculosis H37Ra, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_009565:1866214 | 1866214 | 1890742 | 24529 | Mycobacterium tuberculosis F11, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_012704:652589* | 652589 | 676344 | 23756 | Corynebacterium kroppenstedtii DSM 44385, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_015848:1896660 | 1896660 | 1922091 | 25432 | Mycobacterium canettii CIPT 140010059, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_019950:1870863 | 1870863 | 1896294 | 25432 | Mycobacterium canettii CIPT 140060008 complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_000962:1870842 | 1870842 | 1895342 | 24501 | Mycobacterium tuberculosis H37Rv, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_009480:2580429 | 2580429 | 2618739 | 38311 | Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_007777:4597379 | 4597379 | 4626708 | 29330 | Frankia sp. CcI3, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_013947:1363078* | 1363078 | 1381389 | 18312 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_012815:1757992* | 1757992 | 1780407 | 22416 | Bifidobacterium animalis subsp. lactis DSM 10140, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_012814:1757753* | 1757753 | 1780635 | 22883 | Bifidobacterium animalis subsp. lactis Bl-04, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_013093:125363* | 125363 | 148099 | 22737 | Actinosynnema mirum DSM 43827, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_011145:4628000* | 4628000 | 4658863 | 30864 | Anaeromyxobacter sp. K, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013714:1376500 | 1376500 | 1416140 | 39641 | Bifidobacterium dentium Bd1, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013757:1544348* | 1544348 | 1582199 | 37852 | Geodermatophilus obscurus DSM 43160, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_018750:3249756* | 3249756 | 3273188 | 23433 | Streptomyces venezuelae ATCC 10712, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015573:162000* | 162000 | 184599 | 22600 | Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014100:1144463* | 1144463 | 1171006 | 26544 | Caulobacter segnis ATCC 21756 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013093:4580448 | 4580448 | 4600694 | 20247 | Actinosynnema mirum DSM 43827, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012522:4299287* | 4299287 | 4345203 | 45917 | Rhodococcus opacus B4, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |