Pre_GI: BLASTN Hits

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Query: NC_009512:3282500 Pseudomonas putida F1, complete genome

Start: 3282500, End: 3315887, Length: 33388

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome3e-142513BLASTN svgBLASTP svg
NC_012660:21433762143376220316659791Pseudomonas fluorescens SBW25 chromosome, complete genome2e-38168BLASTN svgBLASTP svg
NC_008752:58588458588461104025157Acidovorax avenae subsp. citrulli AAC00-1, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_004129:53738865373886545259978714Pseudomonas fluorescens Pf-5, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_002488:16389461638946170065561710Xylella fastidiosa 9a5c, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008782:14831551483155150744824294Acidovorax sp. JS42, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_007086:24770402477040251517738138Xanthomonas campestris pv. campestris str. 8004, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009138:1974935*1974935203606461130Herminiimonas arsenicoxydans, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010688:2781624*2781624283409952476Xanthomonas campestris pv. campestris, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014924:25170682517068254012823061Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_009512:27783277836731639534Pseudomonas putida F1, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_002947:8394*83945373745344Pseudomonas putida KT2440, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_010170:1498253*1498253154638148129Bordetella petrii, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013716:3512950*3512950355955346604Citrobacter rodentium ICC168, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_020181:33288443328844335909930256Enterobacter aerogenes EA1509E, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008463:52469545246954530671059757Pseudomonas aeruginosa UCBPP-PA14, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010170:11032241103224112440821185Bordetella petrii, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-0867.9BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-0867.9BLASTN svgBLASTP svg
NC_008344:49039*4903913459985561Nitrosomonas eutropha C91, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010170:4533416*4533416456674433329Bordetella petrii, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_009512:32515453251545327720325659Pseudomonas putida F1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014532:35555503555550358012324574Halomonas elongata DSM 2581, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008786:26695926695929188324925Verminephrobacter eiseniae EF01-2, complete genome4e-0661.9BLASTN svgBLASTP svg