Query: NC_009512:3282500 Pseudomonas putida F1, complete genome
Start: 3282500, End: 3315887, Length: 33388
Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015733:2658337 | 2658337 | 2703381 | 45045 | Pseudomonas putida S16 chromosome, complete genome | 3e-142 | 513 | BLASTN svg | BLASTP svg |
NC_012660:2143376 | 2143376 | 2203166 | 59791 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 2e-38 | 168 | BLASTN svg | BLASTP svg |
NC_008752:585884 | 585884 | 611040 | 25157 | Acidovorax avenae subsp. citrulli AAC00-1, complete genome | 3e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_004129:5373886 | 5373886 | 5452599 | 78714 | Pseudomonas fluorescens Pf-5, complete genome | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_002488:1638946 | 1638946 | 1700655 | 61710 | Xylella fastidiosa 9a5c, complete genome | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_008782:1483155 | 1483155 | 1507448 | 24294 | Acidovorax sp. JS42, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_007086:2477040 | 2477040 | 2515177 | 38138 | Xanthomonas campestris pv. campestris str. 8004, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_009138:1974935* | 1974935 | 2036064 | 61130 | Herminiimonas arsenicoxydans, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_010688:2781624* | 2781624 | 2834099 | 52476 | Xanthomonas campestris pv. campestris, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_014924:2517068 | 2517068 | 2540128 | 23061 | Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_010501:30000 | 30000 | 70428 | 40429 | Pseudomonas putida W619, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009512:27783 | 27783 | 67316 | 39534 | Pseudomonas putida F1, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_002947:8394* | 8394 | 53737 | 45344 | Pseudomonas putida KT2440, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010170:1498253* | 1498253 | 1546381 | 48129 | Bordetella petrii, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013716:3512950* | 3512950 | 3559553 | 46604 | Citrobacter rodentium ICC168, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_012660:2045398* | 2045398 | 2108496 | 63099 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_020181:3328844 | 3328844 | 3359099 | 30256 | Enterobacter aerogenes EA1509E, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_008463:5246954 | 5246954 | 5306710 | 59757 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010170:1103224 | 1103224 | 1124408 | 21185 | Bordetella petrii, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015379:2575000 | 2575000 | 2599434 | 24435 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015379:908904 | 908904 | 971106 | 62203 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008344:49039* | 49039 | 134599 | 85561 | Nitrosomonas eutropha C91, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010170:4533416* | 4533416 | 4566744 | 33329 | Bordetella petrii, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_009512:3251545 | 3251545 | 3277203 | 25659 | Pseudomonas putida F1, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_014532:3555550 | 3555550 | 3580123 | 24574 | Halomonas elongata DSM 2581, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008786:266959 | 266959 | 291883 | 24925 | Verminephrobacter eiseniae EF01-2, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |