Query: NC_008543:90312 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence
Start: 90312, End: 110099, Length: 19788
Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria
General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008061:2153495 | 2153495 | 2183379 | 29885 | Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence | 0 | 39220 | BLASTN svg | BLASTP svg |
| NC_008545:115292 | 115292 | 135814 | 20523 | Burkholderia cenocepacia HI2424 plasmid 1, complete sequence | 0 | 13740 | BLASTN svg | BLASTP svg |
| NC_010552:335989 | 335989 | 356586 | 20598 | Burkholderia ambifaria MC40-6 chromosome 2, complete sequence | 0 | 4230 | BLASTN svg | BLASTP svg |
| NC_010515:1375091 | 1375091 | 1417151 | 42061 | Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence | 0 | 4092 | BLASTN svg | BLASTP svg |
| NC_008390:2156188* | 2156188 | 2182293 | 26106 | Burkholderia cepacia AMMD chromosome 1, complete sequence | 3e-141 | 509 | BLASTN svg | BLASTP svg |
| NC_011002:703194 | 703194 | 754643 | 51450 | Burkholderia cenocepacia J2315 chromosome 3, complete sequence | 1e-29 | 139 | BLASTN svg | BLASTP svg |
| NC_007336:601190 | 601190 | 623161 | 21972 | Ralstonia eutropha JMP134 megaplasmid, complete sequence | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_004578:4781326 | 4781326 | 4816423 | 35098 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_015580:1328361 | 1328361 | 1352338 | 23978 | Novosphingobium sp. PP1Y, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_012791:2233098 | 2233098 | 2252867 | 19770 | Variovorax paradoxus S110 chromosome 1, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_009348:2247500 | 2247500 | 2277576 | 30077 | Aeromonas salmonicida subsp. salmonicida A449, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_016023:1083826 | 1083826 | 1106439 | 22614 | Bacillus coagulans 36D1 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_012856:1 | 1 | 22963 | 22963 | Ralstonia pickettii 12D chromosome 1, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_008060:341851 | 341851 | 364099 | 22249 | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence | 9e-06 | 60 | BLASTN svg | BLASTP svg |