Pre_GI: BLASTN Hits

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Query: NC_008543:90312 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 90312, End: 110099, Length: 19788

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008061:21534952153495218337929885Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence039220BLASTN svgBLASTP svg
NC_008545:11529211529213581420523Burkholderia cenocepacia HI2424 plasmid 1, complete sequence013740BLASTN svgBLASTP svg
NC_010552:33598933598935658620598Burkholderia ambifaria MC40-6 chromosome 2, complete sequence04230BLASTN svgBLASTP svg
NC_010515:13750911375091141715142061Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence04092BLASTN svgBLASTP svg
NC_008390:2156188*2156188218229326106Burkholderia cepacia AMMD chromosome 1, complete sequence3e-141509BLASTN svgBLASTP svg
NC_011002:70319470319475464351450Burkholderia cenocepacia J2315 chromosome 3, complete sequence1e-29139BLASTN svgBLASTP svg
NC_007336:60119060119062316121972Ralstonia eutropha JMP134 megaplasmid, complete sequence6e-1383.8BLASTN svgBLASTP svg
NC_004578:47813264781326481642335098Pseudomonas syringae pv. tomato str. DC3000, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015580:13283611328361135233823978Novosphingobium sp. PP1Y, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012791:22330982233098225286719770Variovorax paradoxus S110 chromosome 1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009348:22475002247500227757630077Aeromonas salmonicida subsp. salmonicida A449, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_016023:10838261083826110643922614Bacillus coagulans 36D1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome9e-0660BLASTN svgBLASTP svg
NC_008060:34185134185136409922249Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence9e-0660BLASTN svgBLASTP svg