Pre_GI: BLASTN Hits

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Query: NC_008543:2220698 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 2220698, End: 2260607, Length: 39910

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010515:21116912111691217367661986Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence049450BLASTN svgBLASTP svg
NC_008061:19028719028724895258666Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence049440BLASTN svgBLASTP svg
NC_008391:69922269922271789818677Burkholderia cepacia AMMD chromosome 2, complete sequence01631BLASTN svgBLASTP svg
NC_013510:22887462288746230946520720Thermomonospora curvata DSM 43183, complete genome4e-68268BLASTN svgBLASTP svg
NC_013947:19569231956923198076223840Stackebrandtia nassauensis DSM 44728 chromosome, complete genome4e-56228BLASTN svgBLASTP svg
NC_009434:17436961743696176409920404Pseudomonas stutzeri A1501, complete genome9e-54220BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-46196BLASTN svgBLASTP svg
NC_009921:1813500*1813500184695033451Frankia sp. EAN1pec, complete genome1e-46196BLASTN svgBLASTP svg
NC_006361:31320003132000316145129452Nocardia farcinica IFM 10152, complete genome5e-46194BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome1e-40176BLASTN svgBLASTP svg
NC_007005:49927304992730502132828599Pseudomonas syringae pv. syringae B728a, complete genome3e-35159BLASTN svgBLASTP svg
NC_012791:26229232622923264743824516Variovorax paradoxus S110 chromosome 1, complete genome1e-31147BLASTN svgBLASTP svg
NC_015556:717993*71799374011322121Pseudomonas fulva 12-X chromosome, complete genome6e-30141BLASTN svgBLASTP svg
NC_014216:28603422860342288514124800Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome6e-30141BLASTN svgBLASTP svg
NC_007509:366836686033156664Burkholderia sp. 383 chromosome 3, complete sequence3e-29139BLASTN svgBLASTP svg
NC_015312:5876957*5876957590027923323Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-27133BLASTN svgBLASTP svg
NC_020210:1704500*1704500175948154982Geobacillus sp. GHH01, complete genome6e-24121BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome2e-23119BLASTN svgBLASTP svg
NC_008391:86534086534088883923500Burkholderia cepacia AMMD chromosome 2, complete sequence6e-21111BLASTN svgBLASTP svg
NC_003552:11572941157294117654819255Methanosarcina acetivorans C2A, complete genome9e-20107BLASTN svgBLASTP svg
NC_010682:30336463033646306386630221Ralstonia pickettii 12J chromosome 1, complete sequence9e-20107BLASTN svgBLASTP svg
NC_012856:26338902633890266223728348Ralstonia pickettii 12D chromosome 1, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_019940:38631243863124388578022657Thioflavicoccus mobilis 8321 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_011002:77224377224379174119499Burkholderia cenocepacia J2315 chromosome 3, complete sequence5e-1591.7BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009832:35000003500000352233422335Serratia proteamaculans 568, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_012779:95755895755898306025503Edwardsiella ictaluri 93-146, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008340:17337351733735176122027486Alkalilimnicola ehrlichei MLHE-1, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_007973:2348481*2348481238802339543Ralstonia metallidurans CH34 chromosome 1, complete sequence5e-0971.9BLASTN svgBLASTP svg
NC_009439:4267356*4267356429048723132Pseudomonas mendocina ymp, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_012856:79892279892282470325782Ralstonia pickettii 12D chromosome 1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_012724:20685882068588209611727530Burkholderia glumae BGR1 chromosome 1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008463:5364428*5364428539303028603Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015376:33208183320818335828337466Burkholderia gladioli BSR3 chromosome chromosome 2, complete5e-0661.9BLASTN svgBLASTP svg
NC_014532:26641392664139271259948461Halomonas elongata DSM 2581, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_012559:23095662309566233407924514Laribacter hongkongensis HLHK9, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_012108:72100572100574071819714Desulfobacterium autotrophicum HRM2, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_007510:19598831959883201803458152Burkholderia sp. 383 chromosome 1, complete sequence5e-0661.9BLASTN svgBLASTP svg