Pre_GI: BLASTN Hits

Some Help

Query: NC_008542:855347 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 855347, End: 889747, Length: 34401

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008060:306170*30617034178635617Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence031380BLASTN svgBLASTP svg
NC_010508:809974*80997484542135448Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence06240BLASTN svgBLASTP svg
NC_007510:759905*75990579524835344Burkholderia sp. 383 chromosome 1, complete sequence04325BLASTN svgBLASTP svg
NC_008785:51650051650055172735228Burkholderia mallei SAVP1 chromosome II, complete sequence02278BLASTN svgBLASTP svg
NC_008836:1072721*1072721111116638446Burkholderia mallei NCTC 10229 chromosome II, complete sequence02278BLASTN svgBLASTP svg
NC_009080:2123987*2123987216243238446Burkholderia mallei NCTC 10247 chromosome II, complete sequence02278BLASTN svgBLASTP svg
NC_006348:2372945*2372945241139038446Burkholderia mallei ATCC 23344 chromosome 1, complete sequence02270BLASTN svgBLASTP svg
NC_009076:3179662*3179662321810738446Burkholderia pseudomallei 1106a chromosome I, complete sequence02266BLASTN svgBLASTP svg
NC_009074:3163362*3163362320181038449Burkholderia pseudomallei 668 chromosome I, complete sequence02250BLASTN svgBLASTP svg
NC_007434:3588081*3588081362652838448Burkholderia pseudomallei 1710b chromosome I, complete sequence02242BLASTN svgBLASTP svg
NC_006350:3329477*3329477336792338447Burkholderia pseudomallei K96243 chromosome 1, complete sequence02218BLASTN svgBLASTP svg
NC_011002:70319470319475464351450Burkholderia cenocepacia J2315 chromosome 3, complete sequence02169BLASTN svgBLASTP svg
NC_007951:570500*57050060471734218Burkholderia xenovorans LB400 chromosome 1, complete sequence0700BLASTN svgBLASTP svg
NC_010804:67108167108170545734377Burkholderia multivorans ATCC 17616 chromosome 1, complete5e-27131BLASTN svgBLASTP svg
NC_010170:23748522374852241026935418Bordetella petrii, complete genome3e-22115BLASTN svgBLASTP svg
NC_009512:44083254408325443184223518Pseudomonas putida F1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_012560:42019694201969423232530357Azotobacter vinelandii DJ, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_021150:42019654201965423232130357Azotobacter vinelandii CA6, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_013595:47580344758034478379725764Streptosporangium roseum DSM 43021, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007651:2639553*2639553269172452172Burkholderia thailandensis E264 chromosome I, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_013093:30684863068486311387545390Actinosynnema mirum DSM 43827, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_008268:2313583*2313583234448830906Rhodococcus sp. RHA1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015957:61193466119346619590076555Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg