Query: NC_008278:7409711 Frankia alni ACN14a, complete genome
Start: 7409711, End: 7432274, Length: 22564
Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_015656:3300747 | 3300747 | 3325024 | 24278 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 0 | 793 | BLASTN svg | BLASTP svg |
| NC_009921:6447151* | 6447151 | 6470287 | 23137 | Frankia sp. EAN1pec, complete genome | 1e-116 | 428 | BLASTN svg | BLASTP svg |
| NC_011894:4066926 | 4066926 | 4110599 | 43674 | Methylobacterium nodulans ORS 2060, complete genome | 5e-54 | 220 | BLASTN svg | BLASTP svg |
| NC_015957:7408466 | 7408466 | 7456099 | 47634 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 5e-51 | 210 | BLASTN svg | BLASTP svg |
| NC_003888:6470909* | 6470909 | 6491442 | 20534 | Streptomyces coelicolor A3(2), complete genome | 3e-43 | 184 | BLASTN svg | BLASTP svg |
| NC_013959:826868 | 826868 | 872099 | 45232 | Sideroxydans lithotrophicus ES-1 chromosome, complete genome | 1e-39 | 172 | BLASTN svg | BLASTP svg |
| NC_003888:5114147* | 5114147 | 5152157 | 38011 | Streptomyces coelicolor A3(2), complete genome | 2e-38 | 168 | BLASTN svg | BLASTP svg |
| NC_003155:365500 | 365500 | 385099 | 19600 | Streptomyces avermitilis MA-4680, complete genome | 1e-36 | 163 | BLASTN svg | BLASTP svg |
| NC_015953:2349503* | 2349503 | 2388099 | 38597 | Streptomyces sp. SirexAA-E chromosome, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
| NC_011027:1763952 | 1763952 | 1782599 | 18648 | Chlorobaculum parvum NCIB 8327, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_015312:4658548 | 4658548 | 4683430 | 24883 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_010546:553774 | 553774 | 576285 | 22512 | Cyanothece sp. ATCC 51142 chromosome circular, complete sequence | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_004463:1898648 | 1898648 | 1964255 | 65608 | Bradyrhizobium japonicum USDA 110, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_014391:621062* | 621062 | 644689 | 23628 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_014216:2860342 | 2860342 | 2885141 | 24800 | Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_021150:4929670 | 4929670 | 4972701 | 43032 | Azotobacter vinelandii CA6, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_012560:4929683 | 4929683 | 4972714 | 43032 | Azotobacter vinelandii DJ, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_009767:5230790* | 5230790 | 5252997 | 22208 | Roseiflexus castenholzii DSM 13941, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_012881:478042 | 478042 | 499316 | 21275 | Desulfovibrio salexigens DSM 2638, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_015416:525018 | 525018 | 549872 | 24855 | Methanosaeta concilii GP-6 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_015434:3581001* | 3581001 | 3610027 | 29027 | Verrucosispora maris AB-18-032 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_009921:6421387 | 6421387 | 6441947 | 20561 | Frankia sp. EAN1pec, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_010424:448865 | 448865 | 470479 | 21615 | Candidatus Desulforudis audaxviator MP104C, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |