Query: NC_008278:6717485 Frankia alni ACN14a, complete genome
Start: 6717485, End: 6740989, Length: 23505
Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008699:1067855* | 1067855 | 1116677 | 48823 | Nocardioides sp. JS614, complete genome | 3e-129 | 470 | BLASTN svg | BLASTP svg |
| NC_014151:1033736 | 1033736 | 1056099 | 22364 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 1e-116 | 428 | BLASTN svg | BLASTP svg |
| NC_003888:5443832 | 5443832 | 5464599 | 20768 | Streptomyces coelicolor A3(2), complete genome | 1e-73 | 285 | BLASTN svg | BLASTP svg |
| NC_013159:3423500 | 3423500 | 3446763 | 23264 | Saccharomonospora viridis DSM 43017, complete genome | 2e-71 | 278 | BLASTN svg | BLASTP svg |
| NC_007760:2126956 | 2126956 | 2150690 | 23735 | Anaeromyxobacter dehalogenans 2CP-C, complete genome | 5e-51 | 210 | BLASTN svg | BLASTP svg |
| NC_009921:5202607* | 5202607 | 5244099 | 41493 | Frankia sp. EAN1pec, complete genome | 3e-46 | 194 | BLASTN svg | BLASTP svg |
| NC_014151:3797861 | 3797861 | 3825673 | 27813 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 3e-43 | 184 | BLASTN svg | BLASTP svg |
| NC_014830:335380* | 335380 | 373393 | 38014 | Intrasporangium calvum DSM 43043 chromosome, complete genome | 2e-41 | 178 | BLASTN svg | BLASTP svg |
| NC_003155:6295078 | 6295078 | 6321099 | 26022 | Streptomyces avermitilis MA-4680, complete genome | 3e-40 | 174 | BLASTN svg | BLASTP svg |
| NC_013595:606096 | 606096 | 625499 | 19404 | Streptosporangium roseum DSM 43021, complete genome | 7e-38 | 167 | BLASTN svg | BLASTP svg |
| NC_012669:4118230 | 4118230 | 4142628 | 24399 | Beutenbergia cavernae DSM 12333, complete genome | 2e-34 | 155 | BLASTN svg | BLASTP svg |
| NC_009439:608500 | 608500 | 630274 | 21775 | Pseudomonas mendocina ymp, complete genome | 9e-28 | 133 | BLASTN svg | BLASTP svg |
| NC_019673:526000* | 526000 | 562128 | 36129 | Saccharothrix espanaensis DSM 44229 complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
| NC_015312:5240653 | 5240653 | 5265965 | 25313 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_012803:361127* | 361127 | 382629 | 21503 | Micrococcus luteus NCTC 2665, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_011662:1160887* | 1160887 | 1190099 | 29213 | Thauera sp. MZ1T, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_015052:1313311* | 1313311 | 1351678 | 38368 | Bifidobacterium longum subsp. infantis 157F, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
| NC_015957:1070500* | 1070500 | 1100581 | 30082 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
| NC_007511:2072838 | 2072838 | 2099719 | 26882 | Burkholderia sp. 383 chromosome 2, complete sequence | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
| NC_008391:404388 | 404388 | 429815 | 25428 | Burkholderia cepacia AMMD chromosome 2, complete sequence | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_010524:4402478* | 4402478 | 4428989 | 26512 | Leptothrix cholodnii SP-6, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_014215:1841064 | 1841064 | 1863181 | 22118 | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_013440:6045708 | 6045708 | 6066797 | 21090 | Haliangium ochraceum DSM 14365, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_004369:3027539* | 3027539 | 3051953 | 24415 | Corynebacterium efficiens YS-314, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_012808:921985 | 921985 | 944629 | 22645 | Methylobacterium extorquens AM1, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_007511:1681764* | 1681764 | 1704099 | 22336 | Burkholderia sp. 383 chromosome 2, complete sequence | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_014355:4151798* | 4151798 | 4175500 | 23703 | Candidatus Nitrospira defluvii, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_011886:177039 | 177039 | 201205 | 24167 | Arthrobacter chlorophenolicus A6, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_011146:3376816 | 3376816 | 3403540 | 26725 | Geobacter bemidjiensis Bem, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_010617:1467000* | 1467000 | 1485187 | 18188 | Kocuria rhizophila DC2201, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_019962:2736815* | 2736815 | 2761099 | 24285 | Natrinema pellirubrum DSM 15624, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_009348:2738742 | 2738742 | 2761729 | 22988 | Aeromonas salmonicida subsp. salmonicida A449, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_009667:1371924* | 1371924 | 1401126 | 29203 | Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008278:667023 | 667023 | 690099 | 23077 | Frankia alni ACN14a, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008278:4023918 | 4023918 | 4061507 | 37590 | Frankia alni ACN14a, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |