Pre_GI: BLASTN Hits

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Query: NC_008278:6717485 Frankia alni ACN14a, complete genome

Start: 6717485, End: 6740989, Length: 23505

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008699:1067855*1067855111667748823Nocardioides sp. JS614, complete genome3e-129470BLASTN svgBLASTP svg
NC_014151:10337361033736105609922364Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-116428BLASTN svgBLASTP svg
NC_003888:54438325443832546459920768Streptomyces coelicolor A3(2), complete genome1e-73285BLASTN svgBLASTP svg
NC_013159:34235003423500344676323264Saccharomonospora viridis DSM 43017, complete genome2e-71278BLASTN svgBLASTP svg
NC_007760:21269562126956215069023735Anaeromyxobacter dehalogenans 2CP-C, complete genome5e-51210BLASTN svgBLASTP svg
NC_009921:5202607*5202607524409941493Frankia sp. EAN1pec, complete genome3e-46194BLASTN svgBLASTP svg
NC_014151:37978613797861382567327813Cellulomonas flavigena DSM 20109 chromosome, complete genome3e-43184BLASTN svgBLASTP svg
NC_014830:335380*33538037339338014Intrasporangium calvum DSM 43043 chromosome, complete genome2e-41178BLASTN svgBLASTP svg
NC_003155:62950786295078632109926022Streptomyces avermitilis MA-4680, complete genome3e-40174BLASTN svgBLASTP svg
NC_013595:60609660609662549919404Streptosporangium roseum DSM 43021, complete genome7e-38167BLASTN svgBLASTP svg
NC_012669:41182304118230414262824399Beutenbergia cavernae DSM 12333, complete genome2e-34155BLASTN svgBLASTP svg
NC_009439:60850060850063027421775Pseudomonas mendocina ymp, complete genome9e-28133BLASTN svgBLASTP svg
NC_019673:526000*52600056212836129Saccharothrix espanaensis DSM 44229 complete genome5e-23117BLASTN svgBLASTP svg
NC_015312:52406535240653526596525313Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_012803:361127*36112738262921503Micrococcus luteus NCTC 2665, complete genome1e-20109BLASTN svgBLASTP svg
NC_011662:1160887*1160887119009929213Thauera sp. MZ1T, complete genome1e-20109BLASTN svgBLASTP svg
NC_015052:1313311*1313311135167838368Bifidobacterium longum subsp. infantis 157F, complete genome3e-18101BLASTN svgBLASTP svg
NC_015957:1070500*1070500110058130082Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_007511:20728382072838209971926882Burkholderia sp. 383 chromosome 2, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_008391:40438840438842981525428Burkholderia cepacia AMMD chromosome 2, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_010524:4402478*4402478442898926512Leptothrix cholodnii SP-6, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014215:18410641841064186318122118Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-1385.7BLASTN svgBLASTP svg
NC_013440:60457086045708606679721090Haliangium ochraceum DSM 14365, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004369:3027539*3027539305195324415Corynebacterium efficiens YS-314, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012808:92198592198594462922645Methylobacterium extorquens AM1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007511:1681764*1681764170409922336Burkholderia sp. 383 chromosome 2, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_014355:4151798*4151798417550023703Candidatus Nitrospira defluvii, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011886:17703917703920120524167Arthrobacter chlorophenolicus A6, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011146:33768163376816340354026725Geobacter bemidjiensis Bem, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010617:1467000*1467000148518718188Kocuria rhizophila DC2201, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019962:2736815*2736815276109924285Natrinema pellirubrum DSM 15624, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009348:27387422738742276172922988Aeromonas salmonicida subsp. salmonicida A449, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009667:1371924*1371924140112629203Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_008278:66702366702369009923077Frankia alni ACN14a, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008278:40239184023918406150737590Frankia alni ACN14a, complete genome3e-0661.9BLASTN svgBLASTP svg