Pre_GI: BLASTN Hits

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Query: NC_008278:5855401 Frankia alni ACN14a, complete genome

Start: 5855401, End: 5894991, Length: 39591

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015656:381554*38155440733625783Frankia symbiont of Datisca glomerata chromosome, complete genome01237BLASTN svgBLASTP svg
NC_009921:52756945275694530509929406Frankia sp. EAN1pec, complete genome01227BLASTN svgBLASTP svg
NC_008278:874015*87401590122927215Frankia alni ACN14a, complete genome7e-79303BLASTN svgBLASTP svg
NC_007777:4016000*4016000403859922600Frankia sp. CcI3, complete genome2e-63252BLASTN svgBLASTP svg
NC_007777:39620003962000397994117942Frankia sp. CcI3, complete genome2e-63252BLASTN svgBLASTP svg
NC_009921:66910896691089673309942011Frankia sp. EAN1pec, complete genome6e-58234BLASTN svgBLASTP svg
NC_006361:36153223615322363714921828Nocardia farcinica IFM 10152, complete genome2e-45192BLASTN svgBLASTP svg
NC_019673:63943196394319646135767039Saccharothrix espanaensis DSM 44229 complete genome2e-42182BLASTN svgBLASTP svg
NC_013595:9994000*99940001001201918020Streptosporangium roseum DSM 43021, complete genome1e-40176BLASTN svgBLASTP svg
NC_015656:16183291618329163809919771Frankia symbiont of Datisca glomerata chromosome, complete genome1e-31147BLASTN svgBLASTP svg
NC_014815:46215524621552466359942048Micromonospora sp. L5 chromosome, complete genome4e-31145BLASTN svgBLASTP svg
NC_014391:45705674570567459134920783Micromonospora aurantiaca ATCC 27029 chromosome, complete genome4e-31145BLASTN svgBLASTP svg
NC_013595:3541012*3541012356209921088Streptosporangium roseum DSM 43021, complete genome2e-29139BLASTN svgBLASTP svg
NC_015434:23754392375439239859923161Verrucosispora maris AB-18-032 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_003888:47504894750489477496724479Streptomyces coelicolor A3(2), complete genome2e-26129BLASTN svgBLASTP svg
NC_009921:86489948648994867311024117Frankia sp. EAN1pec, complete genome4e-22115BLASTN svgBLASTP svg
NC_013757:30121303012130303570423575Geodermatophilus obscurus DSM 43160, complete genome1e-21113BLASTN svgBLASTP svg
NC_008278:53997155399715542275223038Frankia alni ACN14a, complete genome6e-21111BLASTN svgBLASTP svg
NC_007492:20357612035761205955323793Pseudomonas fluorescens PfO-1, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_009921:1736000*1736000175436518366Frankia sp. EAN1pec, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015656:2484749*2484749251548430736Frankia symbiont of Datisca glomerata chromosome, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_013510:3640776*3640776365896018185Thermomonospora curvata DSM 43183, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_007777:32316493231649325503523387Frankia sp. CcI3, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_014666:18448821844882186336118480Frankia sp. EuI1c chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_015312:46585484658548468343024883Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_015957:8677395*8677395870777930385Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_021177:2241647*2241647226649824852Streptomyces fulvissimus DSM 40593, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_015656:105840*10584012383817999Frankia symbiont of Datisca glomerata chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014391:67491566749156676941520260Micromonospora aurantiaca ATCC 27029 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015312:1191633*1191633121600524373Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009921:36668983666898374071873821Frankia sp. EAN1pec, complete genome5e-0661.9BLASTN svgBLASTP svg