Query: NC_008278:5855401 Frankia alni ACN14a, complete genome
Start: 5855401, End: 5894991, Length: 39591
Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015656:381554* | 381554 | 407336 | 25783 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 0 | 1237 | BLASTN svg | BLASTP svg |
NC_009921:5275694 | 5275694 | 5305099 | 29406 | Frankia sp. EAN1pec, complete genome | 0 | 1227 | BLASTN svg | BLASTP svg |
NC_008278:874015* | 874015 | 901229 | 27215 | Frankia alni ACN14a, complete genome | 7e-79 | 303 | BLASTN svg | BLASTP svg |
NC_007777:4016000* | 4016000 | 4038599 | 22600 | Frankia sp. CcI3, complete genome | 2e-63 | 252 | BLASTN svg | BLASTP svg |
NC_007777:3962000 | 3962000 | 3979941 | 17942 | Frankia sp. CcI3, complete genome | 2e-63 | 252 | BLASTN svg | BLASTP svg |
NC_009921:6691089 | 6691089 | 6733099 | 42011 | Frankia sp. EAN1pec, complete genome | 6e-58 | 234 | BLASTN svg | BLASTP svg |
NC_006361:3615322 | 3615322 | 3637149 | 21828 | Nocardia farcinica IFM 10152, complete genome | 2e-45 | 192 | BLASTN svg | BLASTP svg |
NC_019673:6394319 | 6394319 | 6461357 | 67039 | Saccharothrix espanaensis DSM 44229 complete genome | 2e-42 | 182 | BLASTN svg | BLASTP svg |
NC_013595:9994000* | 9994000 | 10012019 | 18020 | Streptosporangium roseum DSM 43021, complete genome | 1e-40 | 176 | BLASTN svg | BLASTP svg |
NC_015656:1618329 | 1618329 | 1638099 | 19771 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-31 | 147 | BLASTN svg | BLASTP svg |
NC_014815:4621552 | 4621552 | 4663599 | 42048 | Micromonospora sp. L5 chromosome, complete genome | 4e-31 | 145 | BLASTN svg | BLASTP svg |
NC_014391:4570567 | 4570567 | 4591349 | 20783 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 4e-31 | 145 | BLASTN svg | BLASTP svg |
NC_013595:3541012* | 3541012 | 3562099 | 21088 | Streptosporangium roseum DSM 43021, complete genome | 2e-29 | 139 | BLASTN svg | BLASTP svg |
NC_015434:2375439 | 2375439 | 2398599 | 23161 | Verrucosispora maris AB-18-032 chromosome, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
NC_003888:4750489 | 4750489 | 4774967 | 24479 | Streptomyces coelicolor A3(2), complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
NC_009921:8648994 | 8648994 | 8673110 | 24117 | Frankia sp. EAN1pec, complete genome | 4e-22 | 115 | BLASTN svg | BLASTP svg |
NC_013757:3012130 | 3012130 | 3035704 | 23575 | Geodermatophilus obscurus DSM 43160, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
NC_008278:5399715 | 5399715 | 5422752 | 23038 | Frankia alni ACN14a, complete genome | 6e-21 | 111 | BLASTN svg | BLASTP svg |
NC_007492:2035761 | 2035761 | 2059553 | 23793 | Pseudomonas fluorescens PfO-1, complete genome | 8e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_009921:1736000* | 1736000 | 1754365 | 18366 | Frankia sp. EAN1pec, complete genome | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
NC_015656:2484749* | 2484749 | 2515484 | 30736 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 8e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_013510:3640776* | 3640776 | 3658960 | 18185 | Thermomonospora curvata DSM 43183, complete genome | 8e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007777:3231649 | 3231649 | 3255035 | 23387 | Frankia sp. CcI3, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_014666:1844882 | 1844882 | 1863361 | 18480 | Frankia sp. EuI1c chromosome, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015312:4658548 | 4658548 | 4683430 | 24883 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015957:8677395* | 8677395 | 8707779 | 30385 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_021177:2241647* | 2241647 | 2266498 | 24852 | Streptomyces fulvissimus DSM 40593, complete genome | 5e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015656:105840* | 105840 | 123838 | 17999 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014391:6749156 | 6749156 | 6769415 | 20260 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015312:1191633* | 1191633 | 1216005 | 24373 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009921:3666898 | 3666898 | 3740718 | 73821 | Frankia sp. EAN1pec, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |