Pre_GI: BLASTN Hits

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Query: NC_008278:1876435 Frankia alni ACN14a, complete genome

Start: 1876435, End: 1898754, Length: 22320

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008278:296526*29652632302726502Frankia alni ACN14a, complete genome01421BLASTN svgBLASTP svg
NC_019673:77976667797666782158623921Saccharothrix espanaensis DSM 44229 complete genome0821BLASTN svgBLASTP svg
NC_008278:30258993025899304559919701Frankia alni ACN14a, complete genome2e-87331BLASTN svgBLASTP svg
NC_015957:2678544*2678544271162733084Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-67264BLASTN svgBLASTP svg
NC_018750:3859127*3859127387774018614Streptomyces venezuelae ATCC 10712, complete genome3e-52214BLASTN svgBLASTP svg
NC_013131:5226919*5226919525205225134Catenulispora acidiphila DSM 44928, complete genome4e-45190BLASTN svgBLASTP svg
NC_003155:22110872211087223044019354Streptomyces avermitilis MA-4680, complete genome4e-39170BLASTN svgBLASTP svg
NC_020126:4974877*4974877500016825292Myxococcus stipitatus DSM 14675, complete genome2e-37165BLASTN svgBLASTP svg
NC_015711:6796082*6796082684217246091Myxococcus fulvus HW-1 chromosome, complete genome1e-32149BLASTN svgBLASTP svg
NC_014666:300571*30057132924028670Frankia sp. EuI1c chromosome, complete genome9e-28133BLASTN svgBLASTP svg
NC_010172:2722000*2722000274449822499Methylobacterium extorquens PA1, complete genome9e-28133BLASTN svgBLASTP svg
NC_008578:22065002206500222474418245Acidothermus cellulolyticus 11B, complete genome5e-26127BLASTN svgBLASTP svg
NC_007760:3848190*3848190387276224573Anaeromyxobacter dehalogenans 2CP-C, complete genome8e-25123BLASTN svgBLASTP svg
NC_008095:4858117*4858117490039542279Myxococcus xanthus DK 1622, complete genome3e-24121BLASTN svgBLASTP svg
NC_019673:1275627*1275627131011934493Saccharothrix espanaensis DSM 44229 complete genome5e-23117BLASTN svgBLASTP svg
NC_013729:2157785*2157785219409936315Kribbella flavida DSM 17836, complete genome8e-22113BLASTN svgBLASTP svg
NC_010524:2761394*2761394278436822975Leptothrix cholodnii SP-6, complete genome8e-22113BLASTN svgBLASTP svg
NC_008702:2259430*2259430228338423955Azoarcus sp. BH72, complete genome1e-20109BLASTN svgBLASTP svg
NC_014318:7821227*7821227785959938373Amycolatopsis mediterranei U32 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_002927:23385492338549238749248944Bordetella bronchiseptica RB50, complete genome8e-19103BLASTN svgBLASTP svg
NC_015185:1414453*1414453144663332181Desulfurobacterium thermolithotrophum DSM 11699 chromosome,3e-18101BLASTN svgBLASTP svg
NC_013947:4695000*4695000472086325864Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_020126:2883194*2883194290469121498Myxococcus stipitatus DSM 14675, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013093:1157476*1157476117633118856Actinosynnema mirum DSM 43827, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007298:1824335*1824335184843524101Dechloromonas aromatica RCB, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008578:1827605*1827605185916131557Acidothermus cellulolyticus 11B, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013739:2106662*2106662213745830797Conexibacter woesei DSM 14684, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013235:1938889*1938889196008021192Nakamurella multipartita DSM 44233, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008025:430487*43048745748426998Deinococcus geothermalis DSM 11300, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_012440:1215838*1215838124846532628Persephonella marina EX-H1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_016048:3983500*3983500400235618857Oscillibacter valericigenes Sjm18-20, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009051:72980729809683523856Methanoculleus marisnigri JR1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014958:3094500*3094500311934324844Deinococcus maricopensis DSM 21211 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014844:1270618*1270618132486354246Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009077:3851203*3851203387313021928Mycobacterium sp. JLS, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_002947:2589951*2589951263659946649Pseudomonas putida KT2440, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002937:1395977*1395977141908123105Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete1e-0869.9BLASTN svgBLASTP svg
NC_014355:4151798*4151798417550023703Candidatus Nitrospira defluvii, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015222:2475792*2475792249670020909Nitrosomonas sp. AL212 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007777:30009413000941302809927159Frankia sp. CcI3, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008278:51460051460053632721728Frankia alni ACN14a, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008710:621822*62182266159939778Borrelia turicatae 91E135, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009921:8215996*8215996825909943104Frankia sp. EAN1pec, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010725:39929483992948402434231395Methylobacterium populi BJ001, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012560:13220001322000135714535146Azotobacter vinelandii DJ, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_021150:13220001322000135715735158Azotobacter vinelandii CA6, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015856:3912195*3912195394272630532Collimonas fungivorans Ter331 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012704:1641684*1641684166548523802Corynebacterium kroppenstedtii DSM 44385, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003888:65680006568000659069022691Streptomyces coelicolor A3(2), complete genome3e-0661.9BLASTN svgBLASTP svg