Query: NC_008271:119957 Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence
Start: 119957, End: 139338, Length: 19382
Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008271:140846 | 140846 | 166546 | 25701 | Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence | 3e-104 | 387 | BLASTN svg | BLASTP svg |
| NC_009142:2725000 | 2725000 | 2754371 | 29372 | Saccharopolyspora erythraea NRRL 2338, complete genome | 4e-48 | 200 | BLASTN svg | BLASTP svg |
| NC_018583:95388 | 95388 | 134611 | 39224 | Gordonia sp. KTR9 plasmid pGKT3, complete sequence | 2e-40 | 174 | BLASTN svg | BLASTP svg |
| NC_014391:4617688* | 4617688 | 4637289 | 19602 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 9e-40 | 172 | BLASTN svg | BLASTP svg |
| NC_003888:7028165* | 7028165 | 7065729 | 37565 | Streptomyces coelicolor A3(2), complete genome | 3e-24 | 121 | BLASTN svg | BLASTP svg |
| NC_008537:12500 | 12500 | 30676 | 18177 | Arthrobacter sp. FB24 plasmid 1, complete sequence | 6e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_009142:5647737* | 5647737 | 5674599 | 26863 | Saccharopolyspora erythraea NRRL 2338, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_015145:3657103 | 3657103 | 3686928 | 29826 | Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_012803:1302261 | 1302261 | 1323804 | 21544 | Micrococcus luteus NCTC 2665, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_003888:8594500 | 8594500 | 8613841 | 19342 | Streptomyces coelicolor A3(2), complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |