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Query: NC_008271:119957 Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence

Start: 119957, End: 139338, Length: 19382

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008271:14084614084616654625701Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence3e-104387BLASTN svgBLASTP svg
NC_009142:27250002725000275437129372Saccharopolyspora erythraea NRRL 2338, complete genome4e-48200BLASTN svgBLASTP svg
NC_018583:953889538813461139224Gordonia sp. KTR9 plasmid pGKT3, complete sequence2e-40174BLASTN svgBLASTP svg
NC_014391:4617688*4617688463728919602Micromonospora aurantiaca ATCC 27029 chromosome, complete genome9e-40172BLASTN svgBLASTP svg
NC_003888:7028165*7028165706572937565Streptomyces coelicolor A3(2), complete genome3e-24121BLASTN svgBLASTP svg
NC_008537:12500125003067618177Arthrobacter sp. FB24 plasmid 1, complete sequence6e-1693.7BLASTN svgBLASTP svg
NC_009142:5647737*5647737567459926863Saccharopolyspora erythraea NRRL 2338, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_015145:36571033657103368692829826Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_012803:13022611302261132380421544Micrococcus luteus NCTC 2665, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003888:85945008594500861384119342Streptomyces coelicolor A3(2), complete genome2e-0661.9BLASTN svgBLASTP svg