Pre_GI: BLASTN Hits

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Query: NC_008148:2053467 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 2053467, End: 2071490, Length: 18024

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013757:37175003717500374103323534Geodermatophilus obscurus DSM 43160, complete genome7e-28133BLASTN svgBLASTP svg
NC_013858:47729847729850922131924Azospirillum sp. B510 plasmid pAB510d, complete sequence2e-22115BLASTN svgBLASTP svg
NC_002944:29297429297431420821235Mycobacterium avium subsp. paratuberculosis K-10, complete genome2e-18101BLASTN svgBLASTP svg
NC_014844:26389942638994265855019557Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008702:33750273375027339883123805Azoarcus sp. BH72, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008595:31286131286133836925509Mycobacterium avium 104, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_013510:3324978*3324978334783522858Thermomonospora curvata DSM 43183, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_007511:71949371949373920719715Burkholderia sp. 383 chromosome 2, complete sequence2e-1591.7BLASTN svgBLASTP svg
NC_013740:15401*154013926023860Acidaminococcus fermentans DSM 20731, complete genome9e-1589.7BLASTN svgBLASTP svg
NC_015957:8103472*8103472812858025109Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_008313:21423972142397216633723941Ralstonia eutropha H16 chromosome 1, complete sequence4e-1487.7BLASTN svgBLASTP svg
NC_010552:20891402089140211228223143Burkholderia ambifaria MC40-6 chromosome 2, complete sequence6e-1383.8BLASTN svgBLASTP svg
NC_008061:42850142850144790319403Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence2e-1281.8BLASTN svgBLASTP svg
NC_010515:23581342358134238144223309Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence2e-1281.8BLASTN svgBLASTP svg
NC_013595:52213305221330524437223043Streptosporangium roseum DSM 43021, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_011979:30701103070110309419024081Geobacter sp. FRC-32, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_015422:3836911*3836911386031223402Alicycliphilus denitrificans K601 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008786:3323167*3323167337505651890Verminephrobacter eiseniae EF01-2, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_003155:74539947453994748164227649Streptomyces avermitilis MA-4680, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008702:40644704064470409211327644Azoarcus sp. BH72, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_013222:299683*29968338036580683Robiginitalea biformata HTCC2501, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014831:78601178601180816322153Thermaerobacter marianensis DSM 12885 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015556:819503*81950384290123399Pseudomonas fulva 12-X chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_020126:5152359*5152359517395921601Myxococcus stipitatus DSM 14675, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010572:6463939*6463939649468830750Streptomyces griseus subsp. griseus NBRC 13350, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_012791:22330982233098225286719770Variovorax paradoxus S110 chromosome 1, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013715:890784*89078491633025547Rothia mucilaginosa DY-18, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015953:1581542*1581542160650824967Streptomyces sp. SirexAA-E chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_021177:17368541736854177659939746Streptomyces fulvissimus DSM 40593, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_012724:32224153222415324513122717Burkholderia glumae BGR1 chromosome 1, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_008609:1394377*1394377141539521019Pelobacter propionicus DSM 2379, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_007963:2555012*2555012257573920728Chromohalobacter salexigens DSM 3043, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_011894:21254742125474214409918626Methylobacterium nodulans ORS 2060, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012560:201237*20123722409922863Azotobacter vinelandii DJ, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_021150:201237*20123722409922863Azotobacter vinelandii CA6, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_002937:61400061400064122427225Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete5e-0763.9BLASTN svgBLASTP svg
NC_005773:69499069499072559930610Pseudomonas syringae pv. phaseolicola 1448A, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_008751:27740002774000279735623357Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_013889:1382705*1382705140993927235Thioalkalivibrio sp. K90mix chromosome, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_020453:3179346*3179346320391224567Agromonas oligotrophica S58 DNA, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_008497:1498430*1498430151761719188Lactobacillus brevis ATCC 367, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010172:37120003712000373446522466Methylobacterium extorquens PA1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010725:39929483992948402434231395Methylobacterium populi BJ001, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015376:36313923631392365107419683Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-0661.9BLASTN svgBLASTP svg
NC_015711:3085038*3085038311227427237Myxococcus fulvus HW-1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015711:89092568909256892967320418Myxococcus fulvus HW-1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014297:12823021282302130564923348Halalkalicoccus jeotgali B3 chromosome, complete genome8e-0660BLASTN svgBLASTP svg
NC_008543:20352922035292205318117890Burkholderia cenocepacia HI2424 chromosome 2, complete sequence8e-0660BLASTN svgBLASTP svg
NC_007958:396439*39643942143724999Rhodopseudomonas palustris BisB5, complete genome8e-0660BLASTN svgBLASTP svg