Pre_GI: BLASTN Hits

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Query: NC_007951:2087385 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2087385, End: 2116706, Length: 29322

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007951:2206263*2206263222784621584Burkholderia xenovorans LB400 chromosome 1, complete sequence05717BLASTN svgBLASTP svg
NC_007951:19289061928906195286323958Burkholderia xenovorans LB400 chromosome 1, complete sequence05325BLASTN svgBLASTP svg
NC_007951:47416204741620476397822359Burkholderia xenovorans LB400 chromosome 1, complete sequence05273BLASTN svgBLASTP svg
NC_007952:32382413238241325679118551Burkholderia xenovorans LB400 chromosome 2, complete sequence05077BLASTN svgBLASTP svg
NC_007951:76950076950079672027221Burkholderia xenovorans LB400 chromosome 1, complete sequence05077BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete04684BLASTN svgBLASTP svg
NC_010801:48160148160150140619806Burkholderia multivorans ATCC 17616 chromosome 3, complete04248BLASTN svgBLASTP svg
NC_010086:18163781816378188976873391Burkholderia multivorans ATCC 17616 chromosome 2, complete03340BLASTN svgBLASTP svg
NC_010805:57570957570964147565767Burkholderia multivorans ATCC 17616 chromosome 2, complete03340BLASTN svgBLASTP svg
NC_007951:29046442904644294513440491Burkholderia xenovorans LB400 chromosome 1, complete sequence0884BLASTN svgBLASTP svg
NC_014117:2684631*2684631271225727627Burkholderia sp. CCGE1002 chromosome chromosome 1, complete0646BLASTN svgBLASTP svg
NC_010627:233572*23357225652922958Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence5e-113416BLASTN svgBLASTP svg
NC_012721:979656979656100222522570Burkholderia glumae BGR1 chromosome 2, complete genome3e-105391BLASTN svgBLASTP svg
NC_012724:25475002547500258413336634Burkholderia glumae BGR1 chromosome 1, complete genome3e-105391BLASTN svgBLASTP svg
NC_006351:27597082759708280620746500Burkholderia pseudomallei K96243 chromosome 2, complete sequence8e-78299BLASTN svgBLASTP svg
NC_014394:13256161325616134634220727Gallionella capsiferriformans ES-2 chromosome, complete genome1e-76295BLASTN svgBLASTP svg
NC_010529:29650029650034723950740Cupriavidus taiwanensis plasmid pRALTA, complete sequence2e-69272BLASTN svgBLASTP svg
NC_015186:2197236*2197236229649299257Acidiphilium multivorum AIU301, complete genome8e-32147BLASTN svgBLASTP svg
NC_011992:33759293375929341716741239Acidovorax ebreus TPSY, complete genome3e-25125BLASTN svgBLASTP svg
NC_011992:35505663550566357056119996Acidovorax ebreus TPSY, complete genome3e-25125BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome7e-23117BLASTN svgBLASTP svg
NC_009075:16387891638789165909920311Burkholderia pseudomallei 668 chromosome II, complete sequence3e-22115BLASTN svgBLASTP svg
NC_004463:55409245540924556841727494Bradyrhizobium japonicum USDA 110, complete genome4e-21111BLASTN svgBLASTP svg
NC_002678:48591114859111488349624386Mesorhizobium loti MAFF303099, complete genome1e-18103BLASTN svgBLASTP svg
NC_010524:824145*82414584860224458Leptothrix cholodnii SP-6, complete genome4e-18101BLASTN svgBLASTP svg
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_007953:35349635349637159918104Burkholderia xenovorans LB400 chromosome 3, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_008782:3110744*3110744313966428921Acidovorax sp. JS42, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_007951:19715841971584198959918016Burkholderia xenovorans LB400 chromosome 1, complete sequence6e-1487.7BLASTN svgBLASTP svg
NC_010086:1907959*1907959194027532317Burkholderia multivorans ATCC 17616 chromosome 2, complete2e-1385.7BLASTN svgBLASTP svg
NC_010805:530876*53087656144030565Burkholderia multivorans ATCC 17616 chromosome 2, complete2e-1385.7BLASTN svgBLASTP svg
NC_010508:19806891980689200677326085Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010002:30023543002354302560623253Delftia acidovorans SPH-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014718:79152879152881681725290Burkholderia rhizoxinica HKI 454 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010804:25186952518695254148822794Burkholderia multivorans ATCC 17616 chromosome 1, complete6e-1177.8BLASTN svgBLASTP svg
NC_015222:1749553*1749553177272623174Nitrosomonas sp. AL212 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014722:16479781647978167820630229Burkholderia rhizoxinica HKI 454, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010512:110932*11093213790426973Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_010512:86693286693289209925168Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_010623:19616851961685204159979915Burkholderia phymatum STM815 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_010943:1332243*1332243137790845666Stenotrophomonas maltophilia K279a, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010551:41548741548744051025024Burkholderia ambifaria MC40-6 chromosome 1, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_004431:32400032400034580421805Escherichia coli CFT073, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_007650:722961*72296174620423244Burkholderia thailandensis E264 chromosome II, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_007651:2639553*2639553269172452172Burkholderia thailandensis E264 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_007651:3560652*3560652359749336842Burkholderia thailandensis E264 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_010170:22469932246993226783320841Bordetella petrii, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019973:27440002744000276369719698Mesorhizobium australicum WSM2073, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015675:28390002839000285961920620Mesorhizobium opportunistum WSM2075 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014923:26720002672000269164419645Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete9e-0763.9BLASTN svgBLASTP svg
NC_010623:18714921871492194209470603Burkholderia phymatum STM815 chromosome 2, complete sequence9e-0763.9BLASTN svgBLASTP svg