Pre_GI: BLASTN Hits

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Query: NC_007948:1972290 Polaromonas sp. JS666, complete genome

Start: 1972290, End: 2018915, Length: 46626

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007951:4608560*4608560463659128032Burkholderia xenovorans LB400 chromosome 1, complete sequence0995BLASTN svgBLASTP svg
NC_015138:53424735342473536228019808Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete0892BLASTN svgBLASTP svg
NC_008825:4025705*4025705405199926295Methylibium petroleiphilum PM1, complete genome0644BLASTN svgBLASTP svg
NC_008609:1976403*1976403207096194559Pelobacter propionicus DSM 2379, complete genome0642BLASTN svgBLASTP svg
NC_015740:3631326*3631326366173930414Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-146527BLASTN svgBLASTP svg
NC_014153:16635971663597168818424588Thiomonas intermedia K12 chromosome, complete genome3e-140507BLASTN svgBLASTP svg
NC_004578:1190000*1190000121945029451Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-114420BLASTN svgBLASTP svg
NC_011992:19682581968258199851030253Acidovorax ebreus TPSY, complete genome7e-95357BLASTN svgBLASTP svg
NC_015458:2338437*2338437237239533959Pusillimonas sp. T7-7 chromosome, complete genome9e-82313BLASTN svgBLASTP svg
NC_007948:16955001695500171430618807Polaromonas sp. JS666, complete genome4e-59238BLASTN svgBLASTP svg
NC_004757:427483*42748347957952097Nitrosomonas europaea ATCC 19718, complete genome3e-41178BLASTN svgBLASTP svg
NC_014315:13969901396990141834221353Nitrosococcus watsoni C-113 chromosome, complete genome1e-28137BLASTN svgBLASTP svg
NC_008782:19176341917634194559927966Acidovorax sp. JS42, complete genome4e-25125BLASTN svgBLASTP svg
NC_008786:3323167*3323167337505651890Verminephrobacter eiseniae EF01-2, complete genome3e-20109BLASTN svgBLASTP svg
NC_007948:15748811574881160833933459Polaromonas sp. JS666, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_015966:16613291661329168678525457Rhodothermus marinus SG0.5JP17-172 chromosome, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_009434:1580205*1580205160112420920Pseudomonas stutzeri A1501, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_016025:59667059667062579729128Candidatus Chloracidobacterium thermophilum B chromosome chromosome9e-1177.8BLASTN svgBLASTP svg
NC_012881:30047843004784303951034727Desulfovibrio salexigens DSM 2638, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence6e-0971.9BLASTN svgBLASTP svg
NC_008782:1277117*1277117129923122115Acidovorax sp. JS42, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_010529:29650029650034723950740Cupriavidus taiwanensis plasmid pRALTA, complete sequence6e-0971.9BLASTN svgBLASTP svg
NC_010801:42190642190645748035575Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-0971.9BLASTN svgBLASTP svg
NC_010801:55027055027059663446365Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-0971.9BLASTN svgBLASTP svg
NC_010805:57570957570964147565767Burkholderia multivorans ATCC 17616 chromosome 2, complete6e-0971.9BLASTN svgBLASTP svg
NC_011206:23695002369500238909919600Acidithiobacillus ferrooxidans ATCC 53993, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_010086:18163781816378188976873391Burkholderia multivorans ATCC 17616 chromosome 2, complete6e-0971.9BLASTN svgBLASTP svg
NC_010087:31906331906336759948537Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-0971.9BLASTN svgBLASTP svg
NC_007759:2097734*2097734212913931406Syntrophus aciditrophicus SB, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008344:554229*55422958419629968Nitrosomonas eutropha C91, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008825:404000*40400042641722418Methylibium petroleiphilum PM1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010524:4644587*4644587468982245236Leptothrix cholodnii SP-6, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_013595:83386198338619836410525487Streptosporangium roseum DSM 43021, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014165:2928464*2928464295012221659Thermobispora bispora DSM 43833 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_021184:1024305*1024305104211117807Desulfotomaculum gibsoniae DSM 7213, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009439:47342374734237475635022114Pseudomonas mendocina ymp, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_012108:21942512194251221910124851Desulfobacterium autotrophicum HRM2, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_010623:18714921871492194209470603Burkholderia phymatum STM815 chromosome 2, complete sequence4e-0765.9BLASTN svgBLASTP svg
NC_007498:16119861611986163200720022Pelobacter carbinolicus DSM 2380, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007498:35409453540945355959918655Pelobacter carbinolicus DSM 2380, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011884:30994883099488312838128894Cyanothece sp. PCC 7425, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014532:26641392664139271259948461Halomonas elongata DSM 2581, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012489:20901620901623761528600Gemmatimonas aurantiaca T-27, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_007484:20455002045500206659921100Nitrosococcus oceani ATCC 19707, complete genome5e-0661.9BLASTN svgBLASTP svg