Query: NC_007912:3403101 Saccharophagus degradans 2-40, complete genome
Start: 3403101, End: 3425681, Length: 22581
Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_007645:6096345* | 6096345 | 6120666 | 24322 | Hahella chejuensis KCTC 2396, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
NC_015740:636667* | 636667 | 659775 | 23109 | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_004347:4302768 | 4302768 | 4337196 | 34429 | Shewanella oneidensis MR-1, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_009434:608765 | 608765 | 682099 | 73335 | Pseudomonas stutzeri A1501, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_008750:3435495* | 3435495 | 3457685 | 22191 | Shewanella sp. W3-18-1, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_002505:2537655* | 2537655 | 2563101 | 25447 | Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_011566:3994239* | 3994239 | 4019709 | 25471 | Shewanella piezotolerans WP3, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_009850:1822239 | 1822239 | 1840599 | 18361 | Arcobacter butzleri RM4018, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009439:574437* | 574437 | 597535 | 23099 | Pseudomonas mendocina ymp, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007520:2128178* | 2128178 | 2153641 | 25464 | Thiomicrospira crunogena XCL-2, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_004461:921364* | 921364 | 958758 | 37395 | Staphylococcus epidermidis ATCC 12228, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_008570:3013263 | 3013263 | 3043291 | 30029 | Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010939:1986263* | 1986263 | 2028567 | 42305 | Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015410:617020 | 617020 | 639607 | 22588 | Pseudomonas mendocina NK-01 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_006510:1446490 | 1446490 | 1472852 | 26363 | Geobacillus kaustophilus HTA426, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008817:1476473* | 1476473 | 1522524 | 46052 | Prochlorococcus marinus str. MIT 9515, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009091:1423677* | 1423677 | 1469667 | 45991 | Prochlorococcus marinus str. MIT 9301, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009465:938378* | 938378 | 979561 | 41184 | Candidatus Vesicomyosocius okutanii HA, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009925:1617414 | 1617414 | 1643909 | 26496 | Acaryochloris marina MBIC11017, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015424:2695847 | 2695847 | 2718725 | 22879 | Aeromonas veronii B565 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_018419:862500 | 862500 | 886099 | 23600 | Secondary endosymbiont of Ctenarytaina eucalypti chromosome, | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013771:393835* | 393835 | 415099 | 21265 | Cyanobacterium UCYN-A, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007413:1570000* | 1570000 | 1592099 | 22100 | Anabaena variabilis ATCC 29413, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |