Pre_GI: BLASTN Hits

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Query: NC_007912:2768363 Saccharophagus degradans 2-40, complete genome

Start: 2768363, End: 2789662, Length: 21300

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009654:3849774*3849774388986740094Marinomonas sp. MWYL1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014366:1814000*1814000183684822849Gamma proteobacterium HdN1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009512:1691930*1691930171807626147Pseudomonas putida F1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002947:49314764931476495751626041Pseudomonas putida KT2440, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010501:4080937*4080937410672725791Pseudomonas putida W619, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008228:36799493679949370368623738Pseudoalteromonas atlantica T6c, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009831:66518665188952123004Shewanella sediminis HAW-EB3, complete genome1e-0560BLASTN svgBLASTP svg
NC_004129:18487011848701187545426754Pseudomonas fluorescens Pf-5, complete genome1e-0560BLASTN svgBLASTP svg