Query: NC_006361:1547034 Nocardia farcinica IFM 10152, complete genome
Start: 1547034, End: 1576759, Length: 29726
Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_006361:4098469* | 4098469 | 4147912 | 49444 | Nocardia farcinica IFM 10152, complete genome | 0 | 1963 | BLASTN svg | BLASTP svg |
| NC_019673:6298342* | 6298342 | 6327932 | 29591 | Saccharothrix espanaensis DSM 44229 complete genome | 5e-70 | 274 | BLASTN svg | BLASTP svg |
| NC_015859:1099919* | 1099919 | 1133504 | 33586 | Corynebacterium variabile DSM 44702 chromosome, complete genome | 2e-41 | 178 | BLASTN svg | BLASTP svg |
| NC_006177:520055 | 520055 | 540538 | 20484 | Symbiobacterium thermophilum IAM 14863, complete genome | 3e-31 | 145 | BLASTN svg | BLASTP svg |
| NC_014844:903877* | 903877 | 926431 | 22555 | Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
| NC_002696:1154996* | 1154996 | 1177186 | 22191 | Caulobacter crescentus CB15, complete genome | 2e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_011769:3434744 | 3434744 | 3463682 | 28939 | Desulfovibrio vulgaris str. 'Miyazaki F', complete genome | 4e-18 | 101 | BLASTN svg | BLASTP svg |
| NC_011959:815601* | 815601 | 836122 | 20522 | Thermomicrobium roseum DSM 5159, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
| NC_007761:241900* | 241900 | 262635 | 20736 | Rhizobium etli CFN 42, complete genome | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_011080:2722492 | 2722492 | 2742171 | 19680 | Salmonella enterica subsp. enterica serovar Newport str. SL254, | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_003197:2720726 | 2720726 | 2740794 | 20069 | Salmonella typhimurium LT2, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_008699:3896816 | 3896816 | 3918676 | 21861 | Nocardioides sp. JS614, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_014391:4672105* | 4672105 | 4704599 | 32495 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_016027:2387832* | 2387832 | 2410099 | 22268 | Gluconacetobacter xylinus NBRC 3288, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015873:2105847 | 2105847 | 2141084 | 35238 | Megasphaera elsdenii DSM 20460, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_006677:215466* | 215466 | 257307 | 41842 | Gluconobacter oxydans 621H, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015656:1876627* | 1876627 | 1898599 | 21973 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_014318:5586287* | 5586287 | 5622485 | 36199 | Amycolatopsis mediterranei U32 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014318:6395392 | 6395392 | 6463099 | 67708 | Amycolatopsis mediterranei U32 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014935:1223817* | 1223817 | 1266099 | 42283 | Nitratifractor saLSUginis DSM 16511 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_015581:1043394 | 1043394 | 1081837 | 38444 | Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_019974:192862* | 192862 | 216276 | 23415 | Natronococcus occultus SP4, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_013743:375459* | 375459 | 402162 | 26704 | Haloterrigena turkmenica DSM 5511, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_007298:2170181* | 2170181 | 2192599 | 22419 | Dechloromonas aromatica RCB, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |