Pre_GI: BLASTN Hits

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Query: NC_005296:2860000 Rhodopseudomonas palustris CGA009, complete genome

Start: 2860000, End: 2884922, Length: 24923

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007958:396439*39643942143724999Rhodopseudomonas palustris BisB5, complete genome02438BLASTN svgBLASTP svg
NC_008313:21423972142397216633723941Ralstonia eutropha H16 chromosome 1, complete sequence4e-113416BLASTN svgBLASTP svg
NC_008702:33750273375027339883123805Azoarcus sp. BH72, complete genome6e-100373BLASTN svgBLASTP svg
NC_002678:48591114859111488349624386Mesorhizobium loti MAFF303099, complete genome6e-60240BLASTN svgBLASTP svg
NC_008148:17116791711679173196220284Rubrobacter xylanophilus DSM 9941, complete genome3e-49204BLASTN svgBLASTP svg
NC_007802:10937851093785111634222558Jannaschia sp. CCS1, complete genome1e-23119BLASTN svgBLASTP svg
NC_014034:995661*995661102273727077Rhodobacter capsulatus SB1003 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007626:69792669792672542027495Magnetospirillum magneticum AMB-1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008700:1627401*1627401165612228722Shewanella amazonensis SB2B, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_012792:10916691091669111509923431Variovorax paradoxus S110 chromosome 2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010397:20635612063561208701523455Mycobacterium abscessus chromosome Chromosome, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_002927:506183*50618356896162779Bordetella bronchiseptica RB50, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002928:507749*50774956809960351Bordetella parapertussis 12822, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007778:39743443974344399557621233Rhodopseudomonas palustris HaA2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013204:29555002955500298012224623Eggerthella lenta DSM 2243, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011894:95789795789798052222626Methylobacterium nodulans ORS 2060, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_006677:435652*43565246548229831Gluconobacter oxydans 621H, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015422:111870118701Alicycliphilus denitrificans K601 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015259:73479573479576624731453Polymorphum gilvum SL003B-26A1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009882:13826*138263610122276Rickettsia rickettsii str. 'Sheila Smith', complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010263:13826*138263609922274Rickettsia rickettsii str. Iowa, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011004:1136895*1136895116187724983Rhodopseudomonas palustris TIE-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012633:12000*120003409922100Rickettsia africae ESF-5, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015866:14071*140713274218672Rickettsia heilongjiangensis 054 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_016050:15224152243358318360Rickettsia japonica YH, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014814:43265004326500435109924600Mycobacterium sp. Spyr1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011757:42057944205794422846522672Methylobacterium chloromethanicum CM4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009720:5046861*5046861507080323943Xanthobacter autotrophicus Py2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008347:1636660*1636660166438627727Maricaulis maris MCS10, complete genome3e-0661.9BLASTN svgBLASTP svg