Query: NC_004668:1427674 Enterococcus faecalis V583, complete genome
Start: 1427674, End: 1445706, Length: 18033
Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria
General Information: This strain is one of the first vancomycin-resistant strains isolated. This isolate came from a blood culture derived from a chronically-infected patient in 1987 from Barnes Hospital in St. Louis, Missouri, USA. This strain was found to lack the cytolysin gene and a surface adhesin, Esp, that contributes to urinary tract infections. Mobile genetic elements make up one quarter of the genome. This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_003212:1713958 | 1713958 | 1749396 | 35439 | Listeria innocua Clip11262, complete genome | 9e-15 | 89.7 | BLASTN svg | BLASTP svg |
| NC_015428:700479* | 700479 | 721767 | 21289 | Lactobacillus buchneri NRRL B-30929 chromosome, complete genome | 1e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_008525:664500* | 664500 | 688275 | 23776 | Pediococcus pentosaceus ATCC 25745, complete genome | 1e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_012121:1444633* | 1444633 | 1468841 | 24209 | Staphylococcus carnosus subsp. carnosus TM300, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_012781:751757* | 751757 | 774134 | 22378 | Eubacterium rectale ATCC 33656, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_007929:473500* | 473500 | 499639 | 26140 | Lactobacillus salivarius subsp. salivarius UCC118, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_008497:1111891* | 1111891 | 1148364 | 36474 | Lactobacillus brevis ATCC 367, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_008526:817628* | 817628 | 836599 | 18972 | Lactobacillus casei ATCC 334, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_010999:880878* | 880878 | 900413 | 19536 | Lactobacillus casei, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_014334:769205* | 769205 | 793638 | 24434 | Lactobacillus casei str. Zhang chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_014976:1174430* | 1174430 | 1199195 | 24766 | Bacillus subtilis BSn5 chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_015975:1493636* | 1493636 | 1516599 | 22964 | Lactobacillus ruminis ATCC 27782 chromosome, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_004668:241352* | 241352 | 267017 | 25666 | Enterococcus faecalis V583, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
| NC_014376:693820* | 693820 | 717399 | 23580 | Clostridium saccharolyticum WM1 chromosome, complete genome | 3e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_020207:1872000 | 1872000 | 1902099 | 30100 | Enterococcus faecium NRRL B-2354, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_012778:403962* | 403962 | 424807 | 20846 | Eubacterium eligens ATCC 27750, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_010001:434803* | 434803 | 464651 | 29849 | Clostridium phytofermentans ISDg, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011567:388358* | 388358 | 416780 | 28423 | Anoxybacillus flavithermus WK1, complete genome | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_003454:249304* | 249304 | 269788 | 20485 | Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete | 5e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_009513:618000* | 618000 | 644458 | 26459 | Lactobacillus reuteri F275, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008530:1551356* | 1551356 | 1588017 | 36662 | Lactobacillus gasseri ATCC 33323, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_007576:435713* | 435713 | 458158 | 22446 | Lactobacillus sakei subsp. sakei 23K, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_006814:403723* | 403723 | 445632 | 41910 | Lactobacillus acidophilus NCFM, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_005362:1651767* | 1651767 | 1690762 | 38996 | Lactobacillus johnsonii NCC 533, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_003030:3324834* | 3324834 | 3349642 | 24809 | Clostridium acetobutylicum ATCC 824, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_003030:1* | 1 | 18599 | 18599 | Clostridium acetobutylicum ATCC 824, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010080:445398* | 445398 | 469770 | 24373 | Lactobacillus helveticus DPC 4571, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014106:419511* | 419511 | 456808 | 37298 | Lactobacillus crispatus ST1, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014387:719245* | 719245 | 740099 | 20855 | Butyrivibrio proteoclasticus B316 chromosome 1, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_018528:446610* | 446610 | 473599 | 26990 | Lactobacillus helveticus R0052 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015697:1814128* | 1814128 | 1855599 | 41472 | Lactobacillus reuteri SD2112 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015687:3326461* | 3326461 | 3351268 | 24808 | Clostridium acetobutylicum DSM 1731 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015687:1* | 1 | 18599 | 18599 | Clostridium acetobutylicum DSM 1731 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015602:117939* | 117939 | 153246 | 35308 | Lactobacillus kefiranofaciens ZW3 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015214:437733* | 437733 | 482599 | 44867 | Lactobacillus acidophilus 30SC chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014724:439594* | 439594 | 485644 | 46051 | Lactobacillus amylovorus GRL 1112 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014833:3667748* | 3667748 | 3687999 | 20252 | Ruminococcus albus 7 chromosome, complete genome | 8e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_014833:1539678* | 1539678 | 1558960 | 19283 | Ruminococcus albus 7 chromosome, complete genome | 8e-06 | 60 | BLASTN svg | BLASTP svg |