Query: NC_004463:1683000 Bradyrhizobium japonicum USDA 110, complete genome
Start: 1683000, End: 1717887, Length: 34888
Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_004463:2262467 | 2262467 | 2311742 | 49276 | Bradyrhizobium japonicum USDA 110, complete genome | 8e-26 | 127 | BLASTN svg | BLASTP svg |
| NC_004463:1749000 | 1749000 | 1768599 | 19600 | Bradyrhizobium japonicum USDA 110, complete genome | 2e-23 | 119 | BLASTN svg | BLASTP svg |
| NC_010515:1124298 | 1124298 | 1152929 | 28632 | Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence | 3e-22 | 115 | BLASTN svg | BLASTP svg |
| NC_020453:6821500 | 6821500 | 6854388 | 32889 | Agromonas oligotrophica S58 DNA, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_011757:4030346* | 4030346 | 4061304 | 30959 | Methylobacterium chloromethanicum CM4, complete genome | 3e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_010172:3946644* | 3946644 | 3970361 | 23718 | Methylobacterium extorquens PA1, complete genome | 3e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_010172:3894652 | 3894652 | 3936475 | 41824 | Methylobacterium extorquens PA1, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
| NC_015376:3249773 | 3249773 | 3273451 | 23679 | Burkholderia gladioli BSR3 chromosome chromosome 2, complete | 7e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_012724:3100430 | 3100430 | 3122072 | 21643 | Burkholderia glumae BGR1 chromosome 1, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_003047:3360000 | 3360000 | 3418599 | 58600 | Sinorhizobium meliloti 1021, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_003063:304962 | 304962 | 334283 | 29322 | Agrobacterium tumefaciens str. C58 chromosome linear, complete | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_003305:1743939 | 1743939 | 1772599 | 28661 | Agrobacterium tumefaciens str. C58 chromosome linear, complete | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_004463:1898648 | 1898648 | 1964255 | 65608 | Bradyrhizobium japonicum USDA 110, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_019940:866969 | 866969 | 888599 | 21631 | Thioflavicoccus mobilis 8321 chromosome, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_012721:1052883* | 1052883 | 1074720 | 21838 | Burkholderia glumae BGR1 chromosome 2, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_007964:3638415 | 3638415 | 3662243 | 23829 | Nitrobacter hamburgensis X14, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_009074:1092000 | 1092000 | 1112224 | 20225 | Burkholderia pseudomallei 668 chromosome I, complete sequence | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_009076:1102500 | 1102500 | 1124599 | 22100 | Burkholderia pseudomallei 1106a chromosome I, complete sequence | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_012724:1* | 1 | 18510 | 18510 | Burkholderia glumae BGR1 chromosome 1, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_020304:752012* | 752012 | 775758 | 23747 | Desulfocapsa sulfexigens DSM 10523, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_020304:2677372* | 2677372 | 2734728 | 57357 | Desulfocapsa sulfexigens DSM 10523, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015848:2381148 | 2381148 | 2404582 | 23435 | Mycobacterium canettii CIPT 140010059, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_010515:1618093* | 1618093 | 1655159 | 37067 | Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_007643:791500* | 791500 | 812712 | 21213 | Rhodospirillum rubrum ATCC 11170, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |