Pre_GI: BLASTN Hits

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Query: NC_004347:3437369 Shewanella oneidensis MR-1, complete genome

Start: 3437369, End: 3458709, Length: 21341

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009999:38832388326239723566Shewanella baltica OS195 plasmid pS19502, complete sequence01846BLASTN svgBLASTP svg
NC_009997:72684072684075726930430Shewanella baltica OS195, complete genome01832BLASTN svgBLASTP svg
NC_008322:1898000*1898000192173523736Shewanella sp. MR-7, complete genome2e-99371BLASTN svgBLASTP svg
NC_005126:32049803204980322748422505Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-39172BLASTN svgBLASTP svg
NC_012917:33787593378759339704718289Pectobacterium carotovorum subsp. carotovorum PC1, complete genome6e-38167BLASTN svgBLASTP svg
NC_012214:12126161212616123625023635Erwinia pyrifoliae Ep1/96, complete genome2e-34155BLASTN svgBLASTP svg
NC_013956:31814213181421320344322023Pantoea ananatis LMG 20103 chromosome, complete genome5e-32147BLASTN svgBLASTP svg
NC_009800:26517302651730267629124562Escherichia coli HS, complete genome9e-31143BLASTN svgBLASTP svg
NC_009052:144619*14461916288518267Shewanella baltica OS155, complete genome9e-31143BLASTN svgBLASTP svg
NC_013282:3216226*3216226324341527190Cronobacter turicensis, complete genome1e-29139BLASTN svgBLASTP svg
NC_009901:48995354899535491945119917Shewanella pealeana ATCC 700345, complete genome8e-28133BLASTN svgBLASTP svg
NC_013456:30115183011518303472823211Vibrio sp. Ex25 chromosome 1, complete genome1e-26129BLASTN svgBLASTP svg
NC_020064:35175003517500354133523836Serratia marcescens FGI94, complete genome1e-23119BLASTN svgBLASTP svg
NC_014500:35197223519722353859918878Dickeya dadantii 3937 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
NC_012912:12956531295653131862422972Dickeya zeae Ech1591, complete genome1e-20109BLASTN svgBLASTP svg
NC_009783:16656101665610168785322244Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence7e-19103BLASTN svgBLASTP svg
NC_006370:84720484720486812520922Photobacterium profundum SS9 chromosome 1, complete sequence7e-19103BLASTN svgBLASTP svg
NC_004605:13854441385444145786672423Vibrio parahaemolyticus RIMD 2210633 chromosome II, complete2e-1695.6BLASTN svgBLASTP svg
NC_020063:11940001194000121676222763Enterobacteriaceae bacterium strain FGI 57, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015637:32556132556134777622216Vibrio anguillarum 775 chromosome chromosome II, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_015633:33800033800035668318684Vibrio anguillarum 775 chromosome chromosome I, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_015633:17020001702000172537323374Vibrio anguillarum 775 chromosome chromosome I, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_002505:86078986078988990629118Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete4e-1487.7BLASTN svgBLASTP svg
NC_006905:26300002630000265438924390Salmonella enterica subsp. enterica serovar Choleraesuis str2e-1385.7BLASTN svgBLASTP svg
NC_002928:13517501351750137549523746Bordetella parapertussis 12822, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015964:1389628*1389628140919019563Haemophilus parainfluenzae T3T1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007712:29780002978000300020322204Sodalis glossinidius str. 'morsitans', complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009997:20698942069894209159921706Shewanella baltica OS195, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009997:40913714091371411415622786Shewanella baltica OS195, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015424:25107642510764253353522772Aeromonas veronii B565 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015566:40490004049000406909920100Serratia sp. AS12 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002940:1234410*1234410125802923620Haemophilus ducreyi 35000HP, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete3e-0971.9BLASTN svgBLASTP svg
NC_008463:12930791293079133019337115Pseudomonas aeruginosa UCBPP-PA14, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008781:21088932108893212953620644Polaromonas naphthalenivorans CJ2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005139:2201820*2201820227810176282Vibrio vulnificus YJ016 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg